RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 C1orf21Q9H246 121 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 DDX18Q9NVP1 670 aaKnown RBP10.51□□□□□ -0.73
CUL4A-201ENST00000326335 CCDC154A6NI56 674 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 BPIP17213 487 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 ITGALP20701 1170 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 RECQLP46063 649 aaPredicted RBP10.51□□□□□ -0.73
CUL4A-201ENST00000326335 HK2P52789 917 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 IST1P53990 364 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 MRPS35P82673 323 aaKnown RBP10.51□□□□□ -0.73
CUL4A-201ENST00000326335 SQLEQ14534 574 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 GTDC1Q4AE62 458 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 RFTN2Q52LD8 501 aaPredicted RBP10.51□□□□□ -0.73
CUL4A-201ENST00000326335 LY6G5CQ5SRR4 150 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 ANKRD26P1Q6NSI1 321 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 BEND5Q7L4P6 421 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 PHACTR4Q8IZ21 702 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 HJURPQ8NCD3 748 aaPredicted RBP10.51□□□□□ -0.73
CUL4A-201ENST00000326335 DLG3Q92796 817 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 NRTNQ99748 197 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 IGFLR1Q9H665 355 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 LHX3Q9UBR4 397 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 NINQ8N4C6 2090 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 C15orf38-AP3S2A0A0A6YYH1 394 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 LEFTY2O00292 366 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 NME4O00746 187 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 IRS1P35568 1242 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 VIPR2P41587 438 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 PREPP48147 710 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 MESP2Q0VG99 397 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 RBBP5Q15291 538 aaKnown RBP10.51□□□□□ -0.73
CUL4A-201ENST00000326335 CRY1Q16526 586 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 ATP6AP1LQ52LC2 224 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 DOK6Q6PKX4 331 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 ARPINQ7Z6K5 226 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 KBTBD6Q86V97 674 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 CLEC4FQ8N1N0 589 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 SCML4Q8N228 414 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 TSEN34Q9BSV6 310 aaKnown RBP10.51□□□□□ -0.73
CUL4A-201ENST00000326335 SLC25A23Q9BV35 468 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 VCX3BQ9H321 246 aa10.51□□□□□ -0.73
CUL4A-201ENST00000326335 PNMA8BQ9ULN7 279 aaPredicted RBP10.51□□□□□ -0.73
CUL4A-201ENST00000326335 PFDN6O15212 129 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 TBC1D4O60343 1298 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 CYBBP04839 570 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ZDHHC11BP0C7U3 371 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ZBTB49Q6ZSB9 765 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 LARP4Q71RC2 724 aaKnown RBP eCLIP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 SFTPA1Q8IWL2 248 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 PDZD8Q8NEN9 1154 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ADAMTS19Q8TE59 1207 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 TMEM79Q9BSE2 394 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 LIN28AQ9H9Z2 209 aaKnown RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ASAH2Q9NR71 780 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 PSMD13Q9UNM6 376 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 DGKBQ9Y6T7 804 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 FAM92AA1XBS5 289 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 MAGEA13PA6NCF6 341 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 TRIM38O00635 465 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 FFAR2O15552 330 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 KERAO60938 352 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 STATHP02808 62 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 HALP42357 657 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 PLEKHG6Q3KR16 790 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 IRGCQ6NXR0 463 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ELMOD1Q8N336 334 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 GPR156Q8NFN8 814 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 TOP1MTQ969P6 601 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 KIAA1191Q96A73 305 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ZSWIM3Q96MP5 696 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 PPP1R2P1Q96PQ5 205 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 MTERF1Q99551 399 aaKnown RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 LTB4R2Q9NPC1 389 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 IL17CQ9P0M4 197 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 CFAP20Q9Y6A4 193 aaKnown RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ZNF236Q9UL36 1845 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 NLRC5Q86WI3 1866 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ANKRD36A6QL64 1941 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 TRIM43BA6NCK2 446 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 TTC34A8MYJ7 566 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 SAP18O00422 153 aaKnown RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 PITPNM1O00562 1244 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 GLUD1P00367 558 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ABCB1P08183 1280 aaPredicted RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 EPCAMP16422 314 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ZNF7P17097 686 aaPredicted RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 HTR7P34969 479 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ETV3P41162 512 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 WDR5P61964 334 aaKnown RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 TRIM25Q14258 630 aaKnown RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 ASTLQ6HA08 431 aaPredicted RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 NCEH1Q6PIU2 408 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 PDSS2Q86YH6 399 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 VRK3Q8IV63 474 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 SLC39A11Q8N1S5 342 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 PCYOX1LQ8NBM8 494 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 TRIM43Q96BQ3 446 aaPredicted RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 UBAP1Q9NZ09 502 aa10.5□□□□□ -0.73
CUL4A-201ENST00000326335 URB1O60287 2271 aaKnown RBP10.5□□□□□ -0.73
CUL4A-201ENST00000326335 CFAP54Q96N23 3096 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms