RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TCEAL2Q9H3H9 227 aaPredicted RBP15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 ZSCAN32Q9NX65 697 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 SLC23A2Q9UGH3 650 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 LGALS13Q9UHV8 139 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 TRMT6Q9UJA5 497 aaKnown RBP15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 KCNK6Q9Y257 313 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 PCDHB1Q9Y5F3 818 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 C10orf142B7Z368 130 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 GRID2O43424 1007 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 RASGRP1O95267 797 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 C2P06681 752 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 SLC35E2BP0CK96 405 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 FDXRP22570 491 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 RPL10P27635 214 aaKnown RBP15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 CSHL1Q14406 222 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 NFE2L1Q14494 772 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 KYAT3Q6YP21 454 aaKnown RBP15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 ABI3BPQ7Z7G0 1075 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 GALNT7Q86SF2 657 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 PLD6Q8N2A8 252 aaKnown RBP15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 CCL4L1Q8NHW4 92 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 CD200R1Q8TD46 325 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 DTX3LQ8TDB6 740 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 ASB12Q8WXK4 309 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 SH3GL2Q99962 352 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 PPCSQ9HAB8 311 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 MLXIPLQ9NP71 852 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 KLQ9UEF7 1012 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 PSMD13Q9UNM6 376 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 BCAT2O15382 392 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 NUAK1O60285 661 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 CNTFP26441 200 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 RABIFP47224 123 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 PRLHRP49683 370 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 CLCN7P51798 805 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 RACK1P63244 317 aaKnown RBP15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 POU4F1Q01851 419 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 SYTL3Q4VX76 610 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 WDR45BQ5MNZ6 344 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 MACC1Q6ZN28 852 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 GALNT13Q8IUC8 556 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 VRK3Q8IV63 474 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 CFAP206Q8IYR0 622 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 EEF1AKMT1Q8WVE0 214 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 KCTD4Q8WVF5 259 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 KCNJ9Q92806 393 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 PGM2Q96G03 612 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 ATP6V1G3Q96LB4 118 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 WDR92Q96MX6 357 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 SELENOSQ9BQE4 189 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 SMOC1Q9H4F8 434 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 KCNK9Q9NPC2 374 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 DNAJC28Q9NX36 388 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 KLF15Q9UIH9 416 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 TLK1Q9UKI8 766 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 HS3ST3A1Q9Y663 406 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 VEGFDO43915 354 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 POP7O75817 140 aaKnown RBP15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 CCDC166P0CW27 439 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 RPS3P23396 243 aaKnown RBP eCLIP15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 AK4P27144 223 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 ADARP55265 1226 aaKnown RBP15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 C16orf46Q6P387 395 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 CDHR3Q6ZTQ4 885 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 LRRTM4Q86VH4 590 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 MTBPQ96DY7 904 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 SMC6Q96SB8 1091 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 TMEM168Q9H0V1 697 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 GULP1Q9UBP9 304 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 CIDEBQ9UHD4 219 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 ST14Q9Y5Y6 855 aa15.15■□□□□ 0.02
PDLIM5-202ENST00000318007 A0A1B0GVT2 93 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 KRT87PA6NCN2 255 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 PATE3B3GLJ2 98 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 GALR2O43603 387 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 SNX2O60749 519 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 LILRB5O75023 590 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 SDC3O75056 442 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 CFIP05156 583 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 CELA2BP08218 269 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 ZNF37AP17032 561 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 PDHA2P29803 388 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 SRP54P61011 504 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 C1orf61Q13536 156 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 ALG11Q2TAA5 492 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 TAF1BQ53T94 588 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 ACSBG2Q5FVE4 666 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 FAM83HQ6ZRV2 1179 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 PIWIL4Q7Z3Z4 852 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 C11orf96Q7Z7L8 435 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 ZBTB2Q8N680 514 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 ANKRD42Q8N9B4 389 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 ZBTB44Q8NCP5 570 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 SPDYE1Q8NFV5 336 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 CFAP61Q8NHU2 1237 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 MGARPQ8TDB4 240 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 EXT2Q93063 718 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 LINGO1Q96FE5 620 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 PANX3Q96QZ0 392 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 LRFN3Q9BTN0 628 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms