RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 DDX6P26196 483 aaKnown RBP eCLIP12.92□□□□□ -0.344e-9■■□□□ 11.8
CPNE1-201ENST00000317677 SLC1A6P48664 564 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 CDKN1CP49918 316 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ALDH18A1P54886 795 aaKnown RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 AQP5P55064 265 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ERVK-21P61565 698 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 CBX2Q14781 532 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 CCDC85BQ15834 202 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 TYSND1Q2T9J0 566 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 EGFLAMQ63HQ2 1017 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ZYG11AQ6WRX3 759 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 MAVSQ7Z434 540 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 RBM23Q86U06 439 aaKnown RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 PIM3Q86V86 326 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 CRLF3Q8IUI8 442 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 EFHBQ8N7U6 833 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 MINDY2Q8NBR6 621 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 OR4L1Q8NH43 312 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 HEXDCQ8WVB3 486 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ANKRD49Q8WVL7 239 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 PIH1D2Q8WWB5 315 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ACDQ96AP0 544 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 CMTM5Q96DZ9 223 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 RPL10LQ96L21 214 aaKnown RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 TNKS2Q9H2K2 1166 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 XPR1Q9UBH6 696 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 SLC8A2Q9UPR5 921 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 MYRFQ9Y2G1 1151 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 CRYL1Q9Y2S2 319 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 RNF11Q9Y3C5 154 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 PCDHB9Q9Y5E1 797 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 PSMD12O00232 456 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-201ENST00000317677 DLL1O00548 723 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 KPNA4O00629 521 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-201ENST00000317677 RSL1D1O76021 490 aaKnown RBP12.91□□□□□ -0.34
CPNE1-201ENST00000317677 GLP2RO95838 553 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 SRCP12931 536 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 CCR10P46092 362 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 EPHB1P54762 984 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 CDKL1Q00532 357 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 TUBB3Q13509 450 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 C6orf52Q5T4I8 152 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 C6orf183Q5T699 404 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 RETSATQ6NUM9 610 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 GPR141Q7Z602 305 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 ZSWIM9Q86XI8 627 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 C12orf76Q8N812 135 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-201ENST00000317677 ITFG1Q8TB96 612 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 C12orf43Q96C57 262 aaKnown RBP12.91□□□□□ -0.34
CPNE1-201ENST00000317677 CLIP3Q96DZ5 547 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 GATA5Q9BWX5 397 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-201ENST00000317677 CATSPERZQ9NTU4 200 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 PNPOQ9NVS9 261 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 OXSMQ9NWU1 459 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 FKBPLQ9UIM3 349 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 DNAJC16Q9Y2G8 782 aa12.91□□□□□ -0.34
CPNE1-201ENST00000317677 RFXAPO00287 272 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 TRIM24O15164 1050 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 PGLSO95336 258 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 FGF19O95750 216 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 ALPIP09923 528 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 CTPS1P17812 591 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 UGT1A6P19224 532 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 OGNP20774 298 aaKnown RBP12.9□□□□□ -0.34
CPNE1-201ENST00000317677 UGT1A1P22309 533 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 UGT1A4P22310 534 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 FDXRP22570 491 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 UGT1A3P35503 534 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 UGT1A5P35504 534 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 PCYT1AP49585 367 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 STC1P52823 247 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 AP1S1P61966 158 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 GPM6BQ13491 265 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 PEX6Q13608 980 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 E2F2Q14209 437 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 SETMARQ53H47 684 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-201ENST00000317677 CARM1Q86X55 608 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 PIANPQ8IYJ0 282 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 RSPRY1Q96DX4 576 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 MYO19Q96H55 970 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 BPIFA1Q9NP55 256 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 PNPLA3Q9NST1 481 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 MED16Q9Y2X0 877 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 VWA7Q9Y334 891 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 AP4S1Q9Y587 144 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 MTCH2Q9Y6C9 303 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 WNT6Q9Y6F9 365 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 A0A087X1B8 175 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 EPOPA6NHQ4 379 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 NEDD8-MDP1E9PL57 170 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 ZNF195O14628 629 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 GPR39O43194 453 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 HTRA2O43464 458 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-201ENST00000317677 DLX3O60479 287 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 ITGAXP20702 1163 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 LPOP22079 712 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-201ENST00000317677 CA5AP35218 305 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 CSNK1DP48730 415 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 ABCE1P61221 599 aaKnown RBP12.9□□□□□ -0.34
CPNE1-201ENST00000317677 ATP6V0D1P61421 351 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms