RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 SRSF1Q07955 248 aaKnown RBP eCLIP17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 TRIM14Q14142 442 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 TCEAL1Q15170 157 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 RPE65Q16518 533 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 ODF2Q5BJF6 829 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 KAZNQ674X7 775 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 FAM151BQ6UXP7 276 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 TMEM135Q86UB9 458 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 AMZ2Q86W34 360 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 DTX3LQ8TDB6 740 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 BRSK1Q8TDC3 778 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 STAMBPL1Q96FJ0 436 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 OXNAD1Q96HP4 312 aaPredicted RBP17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 RAB33BQ9H082 229 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 TRABDQ9H4I3 376 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 SEMA5BQ9P283 1151 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 PSMD13Q9UNM6 376 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 KCTD3Q9Y597 815 aa17.11■□□□□ 0.33
EXOSC4-201ENST00000316052 SPTBN1Q01082 2364 aaKnown RBP17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 KATNA1O75449 491 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 EPOP01588 193 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 FOLR1P15328 257 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 VCLP18206 1134 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 NR1D1P20393 614 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 FECHP22830 423 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 DMPKQ09013 629 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 GTF2H3Q13889 308 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 TFDP2Q14188 446 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 KCNAB1Q14722 419 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 LACTB2Q53H82 288 aaPredicted RBP17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 TMEM220Q6QAJ8 160 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 SPOCD1Q6ZMY3 1216 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 BZW1Q7L1Q6 419 aaKnown RBP17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 VSTM4Q8IW00 320 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 ZNF567Q8N184 647 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 TTC25Q96NG3 672 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 AKIRIN1Q9H9L7 192 aaPredicted RBP17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 LNPEPQ9UIQ6 1025 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 PADI1Q9ULC6 663 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 TP53TG5Q9Y2B4 290 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 PCDHB3Q9Y5E6 796 aa17.1■□□□□ 0.33
EXOSC4-201ENST00000316052 SPOPO43791 374 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 KCNJ13O60928 360 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 MFAP3LO75121 409 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 SPAM1P38567 509 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 SEPT6Q14141 434 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 NFE2L1Q14494 772 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 PTPRCAPQ14761 206 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 SLC1A5Q15758 541 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 PWWP2BQ6NUJ5 590 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 CERS6Q6ZMG9 384 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 PID1Q7Z2X4 250 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 ZC3H18Q86VM9 953 aaKnown RBP17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 PPP1R3BQ86XI6 285 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 BLOC1S5Q8TDH9 187 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 SLC41A2Q96JW4 573 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 FCRL5Q96RD9 977 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 GOLPH3Q9H4A6 298 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 ALG6Q9Y672 507 aa17.09■□□□□ 0.33
EXOSC4-201ENST00000316052 TNRC6AQ8NDV7 1962 aaKnown RBP17.08■□□□□ 0.33
EXOSC4-201ENST00000316052 NBPF19A0A087WUL8 3843 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 GLYATL1P3A0A0U1RQE8 302 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 OR2AG2A6NM03 316 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 CBFA2T2O43439 604 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 CCNYL3P0C7X3 344 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 HALP42357 657 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 UBAP2LQ14157 1087 aaKnown RBP17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 PPP2R5EQ16537 467 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 LDLRAP1Q5SW96 308 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 GPRC6AQ5T6X5 926 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 ZDHHC20Q5W0Z9 365 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 GLT6D1Q7Z4J2 308 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 DDHD1Q8NEL9 900 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 IPMKQ8NFU5 416 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 CT55Q8WUE5 264 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 NAT14Q8WUY8 206 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 HAUS1Q96CS2 278 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 RUFY1Q96T51 708 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 MAP3K3Q99759 626 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 C10orf88Q9H8K7 445 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 LHX9Q9NQ69 397 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 HACD3Q9P035 362 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 KLHL8Q9P2G9 620 aaPredicted RBP17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 KCND3Q9UK17 655 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 INTUQ9ULD6 942 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 PLAAQ9Y263 795 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 PCDHGA6Q9Y5G7 932 aa17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 CFAP20Q9Y6A4 193 aaKnown RBP17.08■□□□□ 0.32
EXOSC4-201ENST00000316052 PIPSLA2A3N6 862 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 CDC14CA4D256 554 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 MTSS1O43312 755 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 CREG1O75629 220 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 MARCKSL1P49006 195 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 TUBB3Q13509 450 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 DNASE1L3Q13609 305 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 METRNLQ641Q3 311 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 BEND7Q8N7W2 519 aaPredicted RBP17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 SIDT2Q8NBJ9 832 aaKnown RBP17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 UBXN4Q92575 508 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms