RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 OR52E6Q96RD3 313 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 TDRD1Q9BXT4 1180 aaKnown RBP13.51□□□□□ -0.25
DDX54-202ENST00000314045 TMCC3Q9ULS5 477 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 A8MT66 165 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 LEFTY1O75610 366 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 RASGRP1O95267 797 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 IMPDH1P20839 514 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 CCR3P51677 355 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 SLC7A2P52569 658 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 IRX1P78414 480 aaPredicted RBP13.51□□□□□ -0.25
DDX54-202ENST00000314045 GCNT7Q6ZNI0 430 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 SPATA19Q7Z5L4 167 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 BHLHE22Q8NFJ8 381 aaPredicted RBP13.51□□□□□ -0.25
DDX54-202ENST00000314045 ITFG1Q8TB96 612 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 KXD1Q9BQD3 176 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 LINC00597Q9H2U6 94 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 RNPEPL1Q9HAU8 725 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 AP3M1Q9Y2T2 418 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 URB1O60287 2271 aaKnown RBP13.51□□□□□ -0.25
DDX54-202ENST00000314045 CDC7O00311 574 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 TNNI3P19429 210 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 IDH3AP50213 366 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 FBXW4P57775 412 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 OTUD3Q5T2D3 398 aaPredicted RBP13.51□□□□□ -0.25
DDX54-202ENST00000314045 IL23RQ5VWK5 629 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 P3H2Q8IVL5 708 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 RBM15BQ8NDT2 890 aaKnown RBP13.51□□□□□ -0.25
DDX54-202ENST00000314045 ACTRT2Q8TDY3 377 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 AIF1LQ9BQI0 150 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 EBF4Q9BQW3 602 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 RNF38Q9H0F5 515 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 MAGEE1Q9HCI5 957 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 FBXL12Q9NXK8 326 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 CACNA2D2Q9NY47 1150 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 ITM2AO43736 263 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 PSMG1O95456 288 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 CD70P32970 193 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 CYS1Q717R9 158 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 ULK2Q8IYT8 1036 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 FIBINQ8TAL6 211 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 PEX13Q92968 403 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 BDH2Q9BUT1 245 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 SLC2A11Q9BYW1 496 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 HPS4Q9NQG7 708 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 MCM3APO60318 1980 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 ECI2O75521 394 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 PRKAG1P54619 331 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 CYP4F2P78329 520 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 EIF2B5Q13144 721 aaKnown RBP13.5□□□□□ -0.25
DDX54-202ENST00000314045 PHKG1Q16816 387 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 ARHGAP12Q8IWW6 846 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 COL26A1Q96A83 441 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 PLEKHA8Q96JA3 519 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 CNBD2Q96M20 576 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 PANX1Q96RD7 426 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 TUBGCP5Q96RT8 1024 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 FAIM2Q9BWQ8 316 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 TRIM38O00635 465 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 PIP5K1BO14986 540 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 GSC2O15499 205 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 TYROBPO43914 113 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 VIPP01282 170 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 GRIA3P42263 894 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 HERVK_113P63132 956 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 GPRC6AQ5T6X5 926 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 ATAD3BQ5T9A4 648 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 TMEM154Q6P9G4 183 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 PLD6Q8N2A8 252 aaKnown RBP13.5□□□□□ -0.25
DDX54-202ENST00000314045 ZNF655Q8N720 491 aaPredicted RBP13.5□□□□□ -0.25
DDX54-202ENST00000314045 PHC3Q8NDX5 983 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 EEF1AKMT1Q8WVE0 214 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 HMGB4Q8WW32 186 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 SCAMP4Q969E2 229 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 PYCR2Q96C36 320 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 ERVK-6Q9BXR3 956 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 CCDC177Q9NQR7 707 aaPredicted RBP13.5□□□□□ -0.25
DDX54-202ENST00000314045 LCHNA4D1U4 455 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 ZW10O43264 779 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 HNRNPRO43390 633 aaKnown RBP13.5□□□□□ -0.25
DDX54-202ENST00000314045 KERAO60938 352 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 HNF1BP35680 557 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 TTC33Q6PID6 262 aaPredicted RBP13.5□□□□□ -0.25
DDX54-202ENST00000314045 CHSY3Q70JA7 882 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 CCT7Q99832 543 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 RTKNQ9BST9 563 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 KLF16Q9BXK1 252 aaPredicted RBP13.5□□□□□ -0.25
DDX54-202ENST00000314045 SLC46A2Q9BY10 475 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 UGT2B28Q9BY64 529 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 WDR26Q9H7D7 661 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 OSER1Q9NX31 292 aa13.5□□□□□ -0.25
DDX54-202ENST00000314045 K7EPI3 171 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 ALDOAP04075 364 aaKnown RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 HOXB2P14652 356 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 TLX1P31314 330 aaPredicted RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 RPL3P39023 403 aaKnown RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 ARSDP51689 593 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 SPIDRQ14159 915 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 HID1Q8IV36 788 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 NXPE1Q8N323 547 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 ATG16L2Q8NAA4 619 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms