RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 MAPKAPK3Q16644 382 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 IDNKQ5T6J7 187 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TTC7BQ86TV6 843 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 UBQLNLQ8IYU4 475 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 C16orf58Q96GQ5 468 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 GPER1Q99527 375 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 NMUR2Q9GZQ4 415 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 OXSMQ9NWU1 459 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MTMR10Q9NXD2 777 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PPP1R14DQ9NXH3 145 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PCSK1NQ9UHG2 260 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 NOCTQ9UK39 431 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 LAMA4Q16363 1823 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 BCKDKO14874 412 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SUV39H1O43463 412 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TBX10O75333 385 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PRH1P02810 166 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ESR1P03372 595 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 USP17L8P0C7I0 530 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 RPA3P35244 121 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MATKP42679 507 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CTSKP43235 329 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ARFIP1P53367 373 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SGCGQ13326 291 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PPP2R2DQ66LE6 453 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 GPRIN3Q6ZVF9 776 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 VASH1Q7L8A9 365 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CPT1CQ8TCG5 803 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SLC22A17Q8WUG5 538 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 NKD1Q969G9 470 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 C8orf48Q96LL4 319 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TBL1YQ9BQ87 522 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 BRINP2Q9C0B6 783 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CCM2LQ9NUG4 571 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 KLHL21Q9UJP4 597 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ENTPD4Q9Y227 616 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 A8MVJ9 347 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TCP10L2B9ZVM9 353 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 H3BNH8 94 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 HLA-DPB1P04440 258 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CD9P21926 228 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PKLRP30613 574 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 RORCP51449 518 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 UGT2B15P54855 530 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PPP3R1P63098 170 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CDKL1Q00532 357 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 IL5RAQ01344 420 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MAD2L1BPQ15013 274 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 EGFLAMQ63HQ2 1017 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SLC22A10Q63ZE4 541 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 STEAP4Q687X5 459 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ZCCHC12Q6PEW1 402 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 USP49Q70CQ1 688 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PARP8Q8N3A8 854 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 HASPINQ8TF76 798 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF514Q96K75 400 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TXN2Q99757 166 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TM9SF2Q99805 663 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PITHD1Q9GZP4 211 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 POLR1EQ9GZS1 481 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MCCC2Q9HCC0 563 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TRMT13Q9NUP7 481 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PLA2G4CQ9UP65 541 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MYH13Q9UKX3 1938 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 A0A0G2JMP0 313 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 FAM196BA6NMK8 535 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 OXSR1O95747 527 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CATP04040 527 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ASGR1P07306 291 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 HOXD8P13378 290 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ALDH4A1P30038 563 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SUOXP51687 545 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CDC20Q12834 499 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ATG9BQ674R7 924 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 RHBDF2Q6PJF5 856 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 DCLRE1AQ6PJP8 1040 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 OTOP1Q7RTM1 612 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TFAP2DQ7Z6R9 452 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ANKRD13BQ86YJ7 626 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 C10orf107Q8IVU9 208 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 OR4M2Q8NGB6 313 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ATXN7L3BQ96GX2 97 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ZC3H10Q96K80 434 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MARCH7Q9H992 704 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 GGT7Q9UJ14 662 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MAB21L2Q9Y586 359 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 NOX1Q9Y5S8 564 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SOBPA7XYQ1 873 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PGRMC2O15173 223 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 BCAS1O75363 584 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SCO1O75880 301 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SCAF4O95104 1147 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CDKN2BP42772 138 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 RIDAP52758 137 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PSPHP78330 225 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF470Q6ECI4 717 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CYP20A1Q6UW02 462 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MFSD7Q6UXD7 560 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 HID1Q8IV36 788 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF615Q8N8J6 731 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 738.9 ms