RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 THOP1P52888 689 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 IRX4P78413 519 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 ZNF460Q14592 562 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 CCDC6Q16204 474 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 MROH9Q5TGP6 573 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 LRIG3Q6UXM1 1119 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 CYHR1Q6ZMK1 362 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 TIFABQ6ZNK6 161 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 KANSL1Q7Z3B3 1105 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 RASGRP3Q8IV61 690 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 VRK3Q8IV63 474 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 OXR1Q8N573 874 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 CD200R1Q8TD46 325 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 KCNJ9Q92806 393 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 FAM136AQ96C01 138 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 TTC1Q99614 292 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 TMEM168Q9H0V1 697 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 ARRDC1-AS1Q9H2J1 176 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 RMI1Q9H9A7 625 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 ERVMER34-1Q9H9K5 563 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 CYP4F12Q9HCS2 524 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.33□□□□□ -0.92
RFX3-201ENST00000302303 CORO1CQ9ULV4 474 aaPredicted RBP9.33□□□□□ -0.92
RFX3-201ENST00000302303 SMG5Q9UPR3 1016 aaKnown RBP9.33□□□□□ -0.92
RFX3-201ENST00000302303 DHRS7Q9Y394 339 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 DNMT3AQ9Y6K1 912 aaPredicted RBP9.33□□□□□ -0.92
RFX3-201ENST00000302303 CACNA1EQ15878 2313 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 PIKFYVEQ9Y2I7 2098 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 C17orf113A0A1B0GUU1 675 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 A6NCN8 305 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 MGAT4DA6NG13 374 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 PRR5-ARHGAP8B1AHC4 643 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 RASGRF2O14827 1237 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 EML2O95834 649 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 INHBAP08476 426 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 NME1P15531 152 aaKnown RBP9.32□□□□□ -0.92
RFX3-201ENST00000302303 ITGB6P18564 788 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 HTR1BP28222 390 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 PDHA2P29803 388 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 PPARGP37231 505 aaPredicted RBP9.32□□□□□ -0.92
RFX3-201ENST00000302303 MPLP40238 635 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 GNPDA1P46926 289 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 RXRGP48443 463 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 ARHGAP8P85298 464 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 DMPKQ09013 629 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 DLG1Q12959 904 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 PTK2BQ14289 1009 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 DUOXA1Q1HG43 343 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 ZNF423Q2M1K9 1284 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 PPM1JQ5JR12 505 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 TCEAL6Q6IPX3 200 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 ZC3H14Q6PJT7 736 aaKnown RBP9.32□□□□□ -0.92
RFX3-201ENST00000302303 PAQR3Q6TCH7 311 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 CRTC3Q6UUV7 619 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 CHST15Q7LFX5 561 aaPredicted RBP9.32□□□□□ -0.92
RFX3-201ENST00000302303 CMC1Q7Z7K0 106 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 LRRTM4Q86VH4 590 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 PARGQ86W56 976 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 SFTPA2Q8IWL1 248 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 SIDT2Q8NBJ9 832 aaKnown RBP9.32□□□□□ -0.92
RFX3-201ENST00000302303 OR2L2Q8NH16 312 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 GPBAR1Q8TDU6 330 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 ANKRD49Q8WVL7 239 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 TCEAL3Q969E4 200 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 DCUN1D1Q96GG9 259 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 ZNF514Q96K75 400 aaPredicted RBP9.32□□□□□ -0.92
RFX3-201ENST00000302303 UBXN10Q96LJ8 280 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 PHOX2BQ99453 314 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 GPR21Q99679 349 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 CCM2Q9BSQ5 444 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 KCNH6Q9H252 994 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 VIPAS39Q9H9C1 493 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 CARS2Q9HA77 564 aaKnown RBP9.32□□□□□ -0.92
RFX3-201ENST00000302303 IL21RQ9HBE5 538 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 ARGLU1Q9NWB6 273 aaPredicted RBP9.32□□□□□ -0.92
RFX3-201ENST00000302303 PSMC3IPQ9P2W1 217 aaPredicted RBP9.32□□□□□ -0.92
RFX3-201ENST00000302303 KLQ9UEF7 1012 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 TBK1Q9UHD2 729 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 ZNHIT2Q9UHR6 403 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 GNPTGQ9UJJ9 305 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 IKZF3Q9UKT9 509 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 VPS9D1Q9Y2B5 631 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 PCDHGA5Q9Y5G8 931 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 COMMD10Q9Y6G5 202 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 PI4KAP42356 2102 aa9.32□□□□□ -0.92
RFX3-201ENST00000302303 MUC6Q6W4X9 2439 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TLDC2A0PJX2 215 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SMIM23A6NLE4 172 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TRIM49D1C9J1S8 452 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CFAP99D6REC4 459 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 DYNC1I1O14576 645 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 KMOO15229 486 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 PHGDHO43175 533 aaKnown RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 CDH16O75309 829 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SLCO2B1O94956 709 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TRIM16O95361 564 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 C2P06681 752 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SNRPAP09012 282 aaKnown RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 OR56A5P0C7T3 313 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SLC35E2BP0CK96 405 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms