RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 CLOCKO15516 846 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 STC2O76061 302 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 ALDH2P05091 517 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 CTPS1P17812 591 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 TTPAP49638 278 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 KPNA1P52294 538 aaPredicted RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 GRIK2Q13002 908 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 TCTN1Q2MV58 587 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 LRRC23Q53EV4 343 aaPredicted RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 CXorf57Q6NSI4 855 aaKnown RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 GOLGA7Q7Z5G4 137 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 EGFL6Q8IUX8 553 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 ABI1Q8IZP0 508 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 OR4F6Q8NGB9 312 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 RNF145Q96MT1 663 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 ZNF382Q96SR6 550 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 CHID1Q9BWS9 393 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 NPLQ9BXD5 320 aaPredicted RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 RNF38Q9H0F5 515 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 TLR9Q9NR96 1032 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 ZIM2Q9NZV7 527 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 ARIH1Q9Y4X5 557 aaPredicted RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 NEUROG3Q9Y4Z2 214 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 MAGED1Q9Y5V3 778 aaPredicted RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 A0A087WXM4 84 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ILVBLA1L0T0 632 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 TRIM64A6NGJ6 449 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 GIPC1O14908 333 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ALPIP09923 528 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 STT3AP46977 705 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ZNF177Q13360 481 aaPredicted RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 PMS2P3Q13401 168 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 GPNMBQ14956 572 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ABRAXAS2Q15018 415 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ATP6AP1LQ52LC2 224 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 RFTN2Q52LD8 501 aaPredicted RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ACBD5Q5T8D3 534 aaPredicted RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 GLYATQ6IB77 296 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 GPR141Q7Z602 305 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 METTL6Q8TCB7 284 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 LKAAEAR1Q8TD35 194 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 SEPT8Q92599 483 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 KCNJ9Q92806 393 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ISOC1Q96CN7 298 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 P2RY12Q9H244 342 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 NTN4Q9HB63 628 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 NMRK2Q9NPI5 230 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 SMPD3Q9NY59 655 aaPredicted RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 SUN2Q9UH99 717 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ZMYM5Q9UJ78 669 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ZNF840PA6NDX5 716 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 FOXD2O60548 495 aaPredicted RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 CLDN11O75508 207 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 HTR1EP28566 365 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 MZF1P28698 734 aaPredicted RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 RPS9P46781 194 aaKnown RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 PIK3CGP48736 1102 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ZIK1Q3SY52 487 aaPredicted RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ATXN7L2Q5T6C5 722 aaPredicted RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 TMEM214Q6NUQ4 689 aaKnown RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 SBSNQ6UWP8 590 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 EFL1Q7Z2Z2 1120 aaKnown RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 HID1Q8IV36 788 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 RIMKLAQ8IXN7 391 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 DTWD1Q8N5C7 304 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 DHRSXQ8N5I4 330 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 BOCQ9BWV1 1114 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 TTLL2Q9BWV7 592 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 SEZ6LQ9BYH1 1024 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 CARS2Q9HA77 564 aaKnown RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 TIMMDC1Q9NPL8 285 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 RIC8BQ9NVN3 520 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 ELOVL2Q9NXB9 296 aa13.44□□□□□ -0.26
BCCIP-202ENST00000299130 POLR3HQ9Y535 204 aaPredicted RBP13.44□□□□□ -0.26
BCCIP-202ENST00000299130 THSD7BQ9C0I4 1608 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 ANKRD28O15084 1053 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 LSM1O15116 133 aaKnown RBP13.43□□□□□ -0.26
BCCIP-202ENST00000299130 NBNO60934 754 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 LDLRP01130 860 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 ENO2P09104 434 aaPredicted RBP13.43□□□□□ -0.26
BCCIP-202ENST00000299130 PCNAP12004 261 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 CAPGP40121 348 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 CLCN4P51793 760 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 TWF1Q12792 350 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 PRKG2Q13237 762 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 SPATS1Q496A3 300 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 ZBED5Q49AG3 693 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 OTUD3Q5T2D3 398 aaPredicted RBP13.43□□□□□ -0.26
BCCIP-202ENST00000299130 NCEH1Q6PIU2 408 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 CYP20A1Q6UW02 462 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 LYSMD3Q7Z3D4 306 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 TBC1D21Q8IYX1 336 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 FAM86B1Q8N7N1 296 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 DBF4BQ8NFT6 615 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 BPIFB1Q8TDL5 484 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 C12orf43Q96C57 262 aaKnown RBP13.43□□□□□ -0.26
BCCIP-202ENST00000299130 LRRC3Q9BY71 257 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 MUC13Q9H3R2 512 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms