RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 PKP2Q99959 881 aa16.31■□□□□ 0.2
SNAPC4-201ENST00000298532 ZDHHC6Q9H6R6 413 aa16.31■□□□□ 0.2
SNAPC4-201ENST00000298532 MKL2Q9ULH7 1088 aa16.31■□□□□ 0.2
SNAPC4-201ENST00000298532 DHRS7Q9Y394 339 aa16.31■□□□□ 0.2
SNAPC4-201ENST00000298532 TP73O15350 636 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 LAG3P18627 525 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 COPS5Q92905 334 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 GPR21Q99679 349 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 LRRC3Q9BY71 257 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 TM6SF2Q9BZW4 377 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 H0Y858 1186 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 ARF4P18085 180 aaPredicted RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 PLEKHG6Q3KR16 790 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 RFTN2Q52LD8 501 aaPredicted RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 ESRP1Q6NXG1 681 aaKnown RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 SLC9A7Q96T83 725 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 ELNP15502 786 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 CD36P16671 472 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 PTX3P26022 381 aaPredicted RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 ICAM3P32942 547 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 KCNA10Q16322 511 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 HECTD3Q5T447 861 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 CHPFQ8IZ52 775 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 OR4K2Q8NGD2 314 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 CSGALNACT1Q8TDX6 532 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 STYXQ8WUJ0 223 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 NSMCE3Q96MG7 304 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 OXCT2Q9BYC2 517 aaPredicted RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 MAN2B2Q9Y2E5 1009 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 KPNA3O00505 521 aaPredicted RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 STK16O75716 305 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 SNX4O95219 450 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 HTR7P34969 479 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 IST1P53990 364 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 E2F2Q14209 437 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 SNAPC1Q16533 368 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 C9orf57Q5W0N0 161 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 TMEM126BQ8IUX1 230 aa16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 ZNF655Q8N720 491 aaPredicted RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 C12orf43Q96C57 262 aaKnown RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 INTS7Q9NVH2 962 aaKnown RBP16.3■□□□□ 0.2
SNAPC4-201ENST00000298532 J3QRK9 145 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 NOBOXO60393 691 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 CDH1P12830 882 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 TLX1P31314 330 aaPredicted RBP16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 UBE2R2Q712K3 238 aaPredicted RBP16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 GLB1L3Q8NCI6 653 aaPredicted RBP16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 FBXL8Q96CD0 374 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 BRD9Q9H8M2 597 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 APOBEC3GQ9HC16 384 aaKnown RBP16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 FAM172BPA6NC97 362 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 GPR25O00155 361 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 FGBP02675 491 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 IFNW1P05000 195 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 MMP3P08254 477 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 ATF6P18850 670 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 SMARCB1Q12824 385 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 CTU1Q7Z7A3 348 aaKnown RBP16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 TBATAQ96M53 351 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 OR52B2Q96RD2 323 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 S100A13Q99584 98 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 PCDHB9Q9Y5E1 797 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 FAM47E-STBD1D6RA91 191 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 TLL1O43897 1013 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 FGF19O95750 216 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 INHAP05111 366 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 HNMTP50135 292 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 RHDQ02161 417 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 FAM151BQ6UXP7 276 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 METTL3Q86U44 580 aaKnown RBP16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 GFM1Q96RP9 751 aaKnown RBP16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 TCF25Q9BQ70 676 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 CNPPD1Q9BV87 410 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 SYNDIG1Q9H7V2 258 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 MAGEE1Q9HCI5 957 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 CFL2Q9Y281 166 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 OAS3Q9Y6K5 1087 aaKnown RBP16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 FABP12A6NFH5 140 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 NDST3O95803 873 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 HLA-DQA2P01906 255 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 CCL23P55773 120 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 TAS2R41P59536 307 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 GPX6P59796 221 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 GCNT6Q5T4J0 391 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 TSTD2Q5T7W7 516 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 SLC25A24Q6NUK1 477 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 PRR23BQ6ZRT6 265 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 SLC13A3Q8WWT9 602 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 COL26A1Q96A83 441 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 KCNS3Q9BQ31 491 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 SLC25A51Q9H1U9 297 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 GULP1Q9UBP9 304 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 SPEF1Q9Y4P9 236 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 ZNF536O15090 1300 aa16.29■□□□□ 0.2
SNAPC4-201ENST00000298532 FAM234BA2RU67 622 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 FAM159BA6NKW6 160 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 CLDN9O95484 217 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms