RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ADAM17P78536 824 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 DNASE1L3Q13609 305 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 ZBED5Q49AG3 693 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 PDZK1Q5T2W1 519 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 RBM20Q5T481 1227 aaKnown RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 ZCCHC8Q6NZY4 707 aaKnown RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 AHSA2Q719I0 299 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 ANKRD46Q86W74 232 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 TP53INP2Q8IXH6 220 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 SH3RF2Q8TEC5 729 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 ASB2Q96Q27 587 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 NODALQ96S42 347 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 IL12RB2Q99665 862 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 WRAP53Q9BUR4 548 aaKnown RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 GBA3Q9H227 469 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 PHPT1Q9NRX4 125 aaPredicted RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 UBAP1Q9NZ09 502 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 OPTCQ9UBM4 332 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 EBF1Q9UH73 591 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 Q9Y3F1 56 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 BRWD1Q9NSI6 2320 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 CD3EAPO15446 510 aaKnown RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 TBX18O95935 607 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 LPOP22079 712 aaPredicted RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 PTPN9P43378 593 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 ZNF792Q3KQV3 632 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 CEP78Q5JTW2 689 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 TXNDC8Q6A555 127 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 CHSY3Q70JA7 882 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 CIR1Q86X95 450 aaPredicted RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 OR10A6Q8NH74 314 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 ZNF778Q96MU6 729 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 OR52E6Q96RD3 313 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 CITED4Q96RK1 184 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 FZD8Q9H461 694 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 ZBTB26Q9HCK0 441 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 POLMQ9NP87 494 aaPredicted RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 CIDEBQ9UHD4 219 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 ACSL4O60488 711 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 CCNKO75909 580 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 CHRM5P08912 532 aaPredicted RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 EFNA1P20827 205 aaPredicted RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 DGKAP23743 735 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 FSHRP23945 695 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 DSC2Q02487 901 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 ACSM2AQ08AH3 577 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 SLC10A2Q12908 348 aaPredicted RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 ACSM2BQ68CK6 577 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 ZNF605Q86T29 641 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.29□□□□□ -0.28
HPS3-201ENST00000296051 ZNF784Q8NCA9 323 aaPredicted RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 CRYGNQ8WXF5 182 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 SLC27A6Q9Y2P4 619 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 ULK1O75385 1050 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 FGF18O76093 207 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 IL7RP16871 459 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 CDK9P50750 372 aaKnown RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 POLR2JP52435 117 aaKnown RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 PRKAG1P54619 331 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 ECT2LQ008S8 904 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 PIGFQ07326 219 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 MYBPC3Q14896 1274 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 SYT16Q17RD7 645 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 FGD3Q5JSP0 725 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 CCNYL2Q5T2Q4 361 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 HFE2Q6ZVN8 426 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 FAM126AQ9BYI3 521 aaPredicted RBP13.29□□□□□ -0.28
HPS3-201ENST00000296051 SIX4Q9UIU6 781 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 OGDHLQ9ULD0 1010 aa13.29□□□□□ -0.28
HPS3-201ENST00000296051 NPEPPSL1A6NEC2 478 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 PSMD11O00231 422 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 CAP1Q01518 475 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 KRR1Q13601 381 aaKnown RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 MED22Q15528 200 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 ARMCX6Q7L4S7 300 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 GPR135Q8IZ08 494 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 LINGO1Q96FE5 620 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 TRMT61BQ9BVS5 477 aaKnown RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 RSPH9Q9H1X1 276 aaPredicted RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 EXO5Q9H790 373 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 PNPLA8Q9NP80 782 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 PIGVQ9NUD9 493 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 ASB3Q9Y575 518 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 LRRC72A6NJI9 287 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 RASGRP1O95267 797 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 NAPRTQ6XQN6 538 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 GRASPQ7Z6J2 395 aaPredicted RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 TAF8Q7Z7C8 310 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 AKAP14Q86UN6 197 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 TRIM69Q86WT6 500 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 RHOBTB2Q9BYZ6 727 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 MAF1Q9H063 256 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 AKTIPQ9H8T0 292 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 TLR9Q9NR96 1032 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 RPS6KB2Q9UBS0 482 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 PDE10AQ9Y233 779 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 GPC6Q9Y625 555 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms