RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 AIG1Q9NVV5 245 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 ZIM2Q9NZV7 527 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SEPT3Q9UH03 358 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 IRAK3Q9Y616 596 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 OAS3Q9Y6K5 1087 aaKnown RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 MYOCOSA0A1B0GUC4 107 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 OR6C75A6NL08 312 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 ARPC2O15144 300 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SNAP91O60641 907 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 RHOBTB1O94844 696 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 URODP06132 367 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 EEF1DP29692 281 aaKnown RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 ETFBP38117 255 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 ZNF140P52738 457 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SMARCB1Q12824 385 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 TAF1AQ15573 450 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SLC36A3Q495N2 470 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 XKR7Q5GH72 579 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SPPL2CQ8IUH8 684 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 LEMD2Q8NC56 503 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SH3RF2Q8TEC5 729 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 EXT2Q93063 718 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 FBXO32Q969P5 355 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 TMEM125Q96AQ2 219 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SPATA17Q96L03 361 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 PSKH2Q96QS6 385 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 ALG2Q9H553 416 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 LEF1Q9UJU2 399 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 AURKCQ9UQB9 309 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 COMMD10Q9Y6G5 202 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 PLXNA3P51805 1871 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 SUPT3HB4E1H0 165 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 TNFRSF10AO00220 468 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 PPP6CO00743 305 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 DLGAP1O14490 977 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 ADAM12O43184 909 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 SUPT3HO75486 399 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 LINC00032P0C843 101 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 CDK4P11802 303 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 HPCAP84074 193 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 ZP2Q05996 745 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 DCTN2Q13561 401 aaKnown RBP12.77□□□□□ -0.37
C9orf3-201ENST00000277198 SMAD2Q15796 467 aaKnown RBP12.77□□□□□ -0.37
C9orf3-201ENST00000277198 ZBED5Q49AG3 693 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 FAM171A1Q5VUB5 890 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 DHRS4L2Q6PKH6 230 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 PAQR3Q6TCH7 311 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 TMEM184AQ6ZMB5 413 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 LPCAT2Q7L5N7 544 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 PROSER1Q86XN7 944 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 HOMEZQ8IX15 550 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 SNX31Q8N9S9 440 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 OR13C4Q8NGS5 318 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 FUBP1Q96AE4 644 aaKnown RBP12.77□□□□□ -0.37
C9orf3-201ENST00000277198 NSUN5Q96P11 429 aaKnown RBP12.77□□□□□ -0.37
C9orf3-201ENST00000277198 CDK5RAP1Q96SZ6 601 aaKnown RBP12.77□□□□□ -0.37
C9orf3-201ENST00000277198 MRPL17Q9NRX2 175 aaKnown RBP12.77□□□□□ -0.37
C9orf3-201ENST00000277198 RIC8BQ9NVN3 520 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 DDX18Q9NVP1 670 aaKnown RBP12.77□□□□□ -0.37
C9orf3-201ENST00000277198 MED16Q9Y2X0 877 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 GMEB1Q9Y692 573 aa12.77□□□□□ -0.37
C9orf3-201ENST00000277198 RNF103-CHMP3A0A140T963 221 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 SLC12A8A0AV02 714 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 C2orf81A6NN90 581 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 IFRD1O00458 451 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-201ENST00000277198 GIPC1O14908 333 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 MUSKO15146 869 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 NDUFS3O75489 264 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 ECI2O75521 394 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 HTR1EP28566 365 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 ACVRL1P37023 503 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 CLCN4P51793 760 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 ADARP55265 1226 aaKnown RBP12.76□□□□□ -0.37
C9orf3-201ENST00000277198 NUP107P57740 925 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 ERVK-8P63133 956 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 PLOD1Q02809 727 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-201ENST00000277198 NFYCQ13952 458 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 MRPL58Q14197 206 aaKnown RBP12.76□□□□□ -0.37
C9orf3-201ENST00000277198 SETMARQ53H47 684 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-201ENST00000277198 PITRM1Q5JRX3 1037 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 C10orf120Q5SQS8 335 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 TTC33Q6PID6 262 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-201ENST00000277198 ISLR2Q6UXK2 745 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 EPHX4Q8IUS5 362 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 PNPLA1Q8N8W4 532 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 TERB1Q8NA31 727 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 OR56A4Q8NGH8 313 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 SMOXQ9NWM0 555 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 HSFX1Q9UBD0 423 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 VWA8A3KMH1 1905 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 FAM234BA2RU67 622 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 CCDC154A6NI56 674 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 F5H5T6 163 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 SNX2O60749 519 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 VPS26AO75436 327 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 SLC22A3O75751 556 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 ENO2P09104 434 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-201ENST00000277198 ZDHHC11BP0C7U3 371 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 TACR2P21452 398 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 PCSK6P29122 969 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms