RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 CILP2Q8IUL8 1156 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 CROCCP3Q8IVE0 287 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 PIK3C3Q8NEB9 887 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 MAML3Q96JK9 1138 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 HIST1H2AHQ96KK5 128 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 HIST1H2AJQ99878 128 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 HOPXQ9BPY8 73 aaPredicted RBP11.28□□□□□ -0.6
SKP2-202ENST00000274255 H2AFJQ9BTM1 129 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 ACAT2Q9BWD1 397 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 ERVK-6Q9BXR3 956 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 ABCB9Q9NP78 766 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 RAD51BO15315 384 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 CBFA2T3O75081 653 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 OPRL1P41146 370 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 MAGEA3P43357 314 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 ST13P50502 369 aaKnown RBP11.28□□□□□ -0.6
SKP2-202ENST00000274255 ADAM17P78536 824 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 BTLAQ7Z6A9 289 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 HMGN2P46Q86SG4 172 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 FUNDC1Q8IVP5 155 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 UBE2FQ969M7 185 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 CIPCQ9C0C6 399 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 CCSER2Q9H7U1 834 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 FARSBQ9NSD9 589 aaKnown RBP11.28□□□□□ -0.6
SKP2-202ENST00000274255 DUS2Q9NX74 493 aaKnown RBP11.28□□□□□ -0.6
SKP2-202ENST00000274255 OPTCQ9UBM4 332 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 MOSPD1Q9UJG1 213 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 POU2F3Q9UKI9 436 aa11.28□□□□□ -0.6
SKP2-202ENST00000274255 DYTNA2CJ06 578 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 BTBD19C9JJ37 291 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 B3GALT4O96024 378 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 CCNCP24863 283 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 CDH18Q13634 790 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 LRP8Q14114 963 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 CHERPQ8IWX8 916 aaKnown RBP11.27□□□□□ -0.6
SKP2-202ENST00000274255 LIX1Q8N485 282 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 RNF175Q8N4F7 328 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 RPL3LQ92901 407 aaKnown RBP11.27□□□□□ -0.6
SKP2-202ENST00000274255 CEP44Q9C0F1 390 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 MKS1Q9NXB0 559 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 ZNF490Q9ULM2 529 aaPredicted RBP11.27□□□□□ -0.6
SKP2-202ENST00000274255 TESMINQ9Y4I5 508 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 CORINQ9Y5Q5 1042 aa11.27□□□□□ -0.6
SKP2-202ENST00000274255 BCKDKO14874 412 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 TPST2O60704 377 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 TOMM70O94826 608 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 CELF2O95319 508 aaKnown RBP11.27□□□□□ -0.61
SKP2-202ENST00000274255 TNFRSF1BP20333 461 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 PRIM2P49643 509 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 RGS4P49798 205 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 DUSP28Q4G0W2 176 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 ZNF648Q5T619 568 aaPredicted RBP11.27□□□□□ -0.61
SKP2-202ENST00000274255 TTC23Q5W5X9 447 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 GPR180Q86V85 440 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 FAM217AQ8IXS0 508 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 FAM86B1Q8N7N1 296 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 CDKN2AIPNLQ96HQ2 116 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 SERPINB11Q96P15 392 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 FCRL5Q96RD9 977 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 MTERF1Q99551 399 aaKnown RBP11.27□□□□□ -0.61
SKP2-202ENST00000274255 TNKS2Q9H2K2 1166 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 IGSF5Q9NSI5 407 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 RCOR3Q9P2K3 495 aaPredicted RBP11.27□□□□□ -0.61
SKP2-202ENST00000274255 UBA2Q9UBT2 640 aaPredicted RBP11.27□□□□□ -0.61
SKP2-202ENST00000274255 RAPGEFL1Q9UHV5 662 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 FCF1Q9Y324 198 aaKnown RBP11.27□□□□□ -0.61
SKP2-202ENST00000274255 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.27□□□□□ -0.61
SKP2-202ENST00000274255 PTGESO14684 152 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 SNPHO15079 494 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 IRAK2O43187 625 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 MAFKO60675 156 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 ATP6V1E1P36543 226 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 TRAF3Q13114 568 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 MAPRE1Q15691 268 aaKnown RBP11.27□□□□□ -0.61
SKP2-202ENST00000274255 SYVN1Q86TM6 617 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 NPLOC4Q8TAT6 608 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 SLCO4A1Q96BD0 722 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 PANX1Q96RD7 426 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 CITED4Q96RK1 184 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 SLC25A51Q9H1U9 297 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 EHD3Q9NZN3 535 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 ERVK-18Q9QC07 812 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 MALT1Q9UDY8 824 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 CDH9Q9ULB4 789 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 PADI3Q9ULW8 664 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 PMF1-BGLAPU3KQ54 211 aa11.27□□□□□ -0.61
SKP2-202ENST00000274255 COL22A1Q8NFW1 1626 aaPredicted RBP11.27□□□□□ -0.61
SKP2-202ENST00000274255 SLX4Q8IY92 1834 aa11.26□□□□□ -0.61
SKP2-202ENST00000274255 KIAA0100Q14667 2235 aaKnown RBP11.26□□□□□ -0.61
SKP2-202ENST00000274255 FUOMA2VDF0 154 aa11.26□□□□□ -0.61
SKP2-202ENST00000274255 CLDN25C9JDP6 229 aa11.26□□□□□ -0.61
SKP2-202ENST00000274255 SAP18O00422 153 aaKnown RBP11.26□□□□□ -0.61
SKP2-202ENST00000274255 SOCS7O14512 581 aa11.26□□□□□ -0.61
SKP2-202ENST00000274255 NDUFS2O75306 463 aa11.26□□□□□ -0.61
SKP2-202ENST00000274255 SLC25A14O95258 325 aaPredicted RBP11.26□□□□□ -0.61
SKP2-202ENST00000274255 SNAI1O95863 264 aaPredicted RBP11.26□□□□□ -0.61
SKP2-202ENST00000274255 DNTTP04053 509 aa11.26□□□□□ -0.61
SKP2-202ENST00000274255 COL6A2P12110 1019 aa11.26□□□□□ -0.61
SKP2-202ENST00000274255 SHMT2P34897 504 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms