RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 TOP6BLQ8N6T0 577 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 CLHC1Q8NHS4 586 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 PPTC7Q8NI37 304 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 MCOLN3Q8TDD5 553 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 AURKBQ96GD4 344 aaPredicted RBP12.77□□□□□ -0.37
COL8A1-202ENST00000273342 ATOH8Q96SQ7 321 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 IKZF5Q9H5V7 419 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 TMLHEQ9NVH6 421 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 KIAA1522Q9P206 1035 aaPredicted RBP12.77□□□□□ -0.37
COL8A1-202ENST00000273342 ENPP5Q9UJA9 477 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 SLC1A7O00341 560 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 UGT2B11O75310 529 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 DIRAS1O95057 198 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 CNPP09543 421 aaKnown RBP12.76□□□□□ -0.37
COL8A1-202ENST00000273342 RAP2AP10114 183 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 UMPSP11172 480 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 SELENBP1Q13228 472 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 PTGR1Q14914 329 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 PTPRRQ15256 657 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 GTDC1Q4AE62 458 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 C6orf136Q5SQH8 315 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 IL27RAQ6UWB1 636 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 ANKRD13BQ86YJ7 626 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 HID1Q8IV36 788 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 FAM162AQ96A26 154 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 SP110Q9HB58 689 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 RASSF1Q9NS23 344 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 VAPAQ9P0L0 249 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 POLR3HQ9Y535 204 aaPredicted RBP12.76□□□□□ -0.37
COL8A1-202ENST00000273342 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 HHLA1C9JL84 531 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 E9PAM4 449 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 FZD9O00144 591 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 GPR39O43194 453 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 EEDO75530 441 aaKnown RBP12.76□□□□□ -0.37
COL8A1-202ENST00000273342 SLC25A27O95847 323 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 CHEK2O96017 543 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 C7P10643 843 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 JUNBP17275 347 aaPredicted RBP12.76□□□□□ -0.37
COL8A1-202ENST00000273342 PFKLP17858 780 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 EEFSECP57772 596 aaKnown RBP12.76□□□□□ -0.37
COL8A1-202ENST00000273342 PRKG2Q13237 762 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 RAPSNQ13702 412 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 SNX17Q15036 470 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 NR6A1Q15406 480 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 TRIP4Q15650 581 aaPredicted RBP12.76□□□□□ -0.37
COL8A1-202ENST00000273342 TTC23Q5W5X9 447 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 DET1Q7L5Y6 550 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 OR6J1Q8NGC5 347 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 PTCD2Q8WV60 388 aaKnown RBP12.76□□□□□ -0.37
COL8A1-202ENST00000273342 UBE2FQ969M7 185 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 GPR21Q99679 349 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 YTHDF1Q9BYJ9 559 aaKnown RBP12.76□□□□□ -0.37
COL8A1-202ENST00000273342 ABCG8Q9H221 673 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 RIBC2Q9H4K1 309 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 CATSPERBQ9H7T0 1116 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL8A1-202ENST00000273342 CD274Q9NZQ7 290 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 PMF1-BGLAPU3KQ54 211 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 NUP214P35658 2090 aaPredicted RBP12.76□□□□□ -0.37
COL8A1-202ENST00000273342 PSME4Q14997 1843 aa12.76□□□□□ -0.37
COL8A1-202ENST00000273342 SSC5DA1L4H1 1573 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 ZNF99A8MXY4 864 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-202ENST00000273342 TREHO43280 583 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 TBX1O43435 398 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 LDB2O43679 373 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 DLGAP3O95886 979 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 GSNP06396 782 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SMPD1P17405 629 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 BRCC3P46736 316 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 EMX2Q04743 252 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 TUBA3CQ13748 450 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 PHKG1Q16816 387 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 ALFQ53S48 1182 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 UBXN11Q5T124 520 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 GCNT7Q6ZNI0 430 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SCN4BQ8IWT1 228 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 PAPD5Q8NDF8 572 aaKnown RBP12.75□□□□□ -0.37
COL8A1-202ENST00000273342 RORBQ92753 470 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 EXOC2Q96KP1 924 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 DACH2Q96NX9 599 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 BARD1Q99728 777 aaKnown RBP12.75□□□□□ -0.37
COL8A1-202ENST00000273342 ZFP14Q9HCL3 533 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 AKIP1Q9NQ31 210 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 HACD3Q9P035 362 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 ZNF639Q9UID6 485 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 IQCF5A8MTL0 148 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 GABRDO14764 452 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 FFAR3O14843 346 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 GPR42O15529 346 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SLC7A4O43246 635 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 PRSS23O95084 383 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SEC24AO95486 1093 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 OR4Q2P0C623 313 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 FDXRP22570 491 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 HTR1EP28566 365 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 VAC14Q08AM6 782 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 GTF2H3Q13889 308 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SYT16Q17RD7 645 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms