RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 ZNF280BQ86YH2 543 aa16.7■□□□□ 0.26
RTN1-201ENST00000267484 FAM126BQ8IXS8 530 aa16.7■□□□□ 0.26
RTN1-201ENST00000267484 EFHBQ8N7U6 833 aa16.7■□□□□ 0.26
RTN1-201ENST00000267484 CCDC97Q96F63 343 aaPredicted RBP16.7■□□□□ 0.26
RTN1-201ENST00000267484 AASSQ9UDR5 926 aa16.7■□□□□ 0.26
RTN1-201ENST00000267484 ZMYM5Q9UJ78 669 aa16.7■□□□□ 0.26
RTN1-201ENST00000267484 SLC27A5Q9Y2P5 690 aa16.7■□□□□ 0.26
RTN1-201ENST00000267484 PRG3Q9Y2Y8 225 aaPredicted RBP16.7■□□□□ 0.26
RTN1-201ENST00000267484 PTGES3LE9PB15 166 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 CPNE6O95741 557 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 ENO2P09104 434 aaPredicted RBP16.69■□□□□ 0.26
RTN1-201ENST00000267484 UMPSP11172 480 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 HLA-DPA1P20036 260 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 TTKP33981 857 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 THPOP40225 353 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 PBX3P40426 434 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 ALDH3A2P51648 485 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 PLA2G16P53816 162 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 IL10RBQ08334 325 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 MAPRE1Q15691 268 aaKnown RBP16.69■□□□□ 0.26
RTN1-201ENST00000267484 FAM110CQ1W6H9 321 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 GRAMD4Q6IC98 578 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 ISG20Q96AZ6 181 aaKnown RBP16.69■□□□□ 0.26
RTN1-201ENST00000267484 C17orf80Q9BSJ5 609 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 IKZF5Q9H5V7 419 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 NLRC5Q86WI3 1866 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 PTPRDP23468 1912 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 FAM234BA2RU67 622 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 E2F3O00716 465 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 TOR1BO14657 336 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 VPS4BO75351 444 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 TSPAN12O95859 305 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 C7P10643 843 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 CDH1P12830 882 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 RELAQ04206 551 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 TUSC3Q13454 348 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 SPCS2Q15005 226 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 NR6A1Q15406 480 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 CYP2A13Q16696 494 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 TYSND1Q2T9J0 566 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 RFTN2Q52LD8 501 aaPredicted RBP16.69■□□□□ 0.26
RTN1-201ENST00000267484 ZFAND4Q86XD8 727 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 METTL6Q8TCB7 284 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 VAPAQ9P0L0 249 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 FKBPLQ9UIM3 349 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 PCDHGC4Q9Y5F7 938 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 U3KQV3 271 aa16.69■□□□□ 0.26
RTN1-201ENST00000267484 SERPINF2P08697 491 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 HTR1AP08908 422 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 CD97P48960 835 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 MAP2K5Q13163 448 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 AQP6Q13520 282 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 PTGR1Q14914 329 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 MOGQ16653 247 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 CTU2Q2VPK5 515 aaKnown RBP16.68■□□□□ 0.26
RTN1-201ENST00000267484 BROXQ5VW32 411 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 GPSM1Q86YR5 675 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 KATNAL1Q9BW62 490 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 TRNAU1APQ9NX07 287 aaKnown RBP16.68■□□□□ 0.26
RTN1-201ENST00000267484 NOD1Q9Y239 953 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 DICER1Q9UPY3 1922 aaKnown RBP16.68■□□□□ 0.26
RTN1-201ENST00000267484 OGNP20774 298 aaKnown RBP16.68■□□□□ 0.26
RTN1-201ENST00000267484 CRHBPP24387 322 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 KCNQ1P51787 676 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 C9orf131Q5VYM1 1079 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 NADSYN1Q6IA69 706 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 RBM23Q86U06 439 aaKnown RBP16.68■□□□□ 0.26
RTN1-201ENST00000267484 OR56A4Q8NGH8 313 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 OR10A6Q8NH74 314 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 CGREF1Q99674 301 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 AMBRA1Q9C0C7 1298 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 INIPQ9NRY2 104 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 MARCH2Q9P0N8 246 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 KANSL1LA0AUZ9 987 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 SEC14L2O76054 403 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 FSHRP23945 695 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 ZNF140P52738 457 aaPredicted RBP16.68■□□□□ 0.26
RTN1-201ENST00000267484 PDCD4Q53EL6 469 aaKnown RBP16.68■□□□□ 0.26
RTN1-201ENST00000267484 EGFLAMQ63HQ2 1017 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 CYP20A1Q6UW02 462 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 SPARTQ8N0X7 666 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 ZBTB8BQ8NAP8 495 aaPredicted RBP16.68■□□□□ 0.26
RTN1-201ENST00000267484 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 BEGAINQ9BUH8 593 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 LIMD1Q9UGP4 676 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 PCDHB3Q9Y5E6 796 aa16.68■□□□□ 0.26
RTN1-201ENST00000267484 CBFA2T3O75081 653 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 DEAF1O75398 565 aaPredicted RBP16.67■□□□□ 0.26
RTN1-201ENST00000267484 ITGB6P18564 788 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 HOXC8P31273 242 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 RXRGP48443 463 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 CHRNB3Q05901 458 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 ZRANB3Q5FWF4 1079 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 CTSL3PQ5NE16 218 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 SPESP1Q6UW49 350 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 THAP5Q7Z6K1 395 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 PROSER1Q86XN7 944 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 COLGALT2Q8IYK4 626 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 ATP6V0D2Q8N8Y2 350 aa16.67■□□□□ 0.26
RTN1-201ENST00000267484 LPCAT1Q8NF37 534 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms