RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 MYBPC1Q00872 1141 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 RFTN1Q14699 578 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF423Q2M1K9 1284 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 PIGGQ5H8A4 983 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 LHX8Q68G74 356 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 HOMEZQ8IX15 550 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 GPR152Q8TDT2 470 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ZFP14Q9HCL3 533 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 INTS10Q9NVR2 710 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 KLQ9UEF7 1012 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 SNX10Q9Y5X0 201 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ANKRD33BA6NCL7 494 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 ARPC2O15144 300 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 RSL1D1O76021 490 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 SLC26A3P40879 764 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 TRIP4Q15650 581 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 THOC7Q6I9Y2 204 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 FBXL19Q6PCT2 694 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 ZC3HC1Q86WB0 502 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 OTULINQ96BN8 352 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 GMIPQ9P107 970 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 WBP11Q9Y2W2 641 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 TNPO3Q9Y5L0 923 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 TCRBV5S1A1TA0A578 114 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 H0YJX3 145 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 H3BMM5 538 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 AREL1O15033 823 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 TULP3O75386 442 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 PAGE1O75459 146 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 GMPRP36959 345 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 HALP42357 657 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 CXCR3P49682 368 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 RAB14P61106 215 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 RPL38P63173 70 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 OLIG2Q13516 323 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 TGFBIQ15582 683 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 CHST15Q7LFX5 561 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 GALNT5Q7Z7M9 940 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 LUZP2Q86TE4 346 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 LDB1Q86U70 411 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 C7orf61Q8IZ16 206 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF557Q8N988 423 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 MINDY2Q8NBR6 621 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 MCOLN3Q8TDD5 553 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 PTCD2Q8WV60 388 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 GPR22Q99680 433 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 SMOC2Q9H3U7 446 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 FBXL21Q9UKT6 434 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 TCAF1Q9Y4C2 921 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 CCDC162PA2VCL2 907 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 RGS10O43665 173 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 FGF19O95750 216 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 RHOCP08134 193 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 MS4A2Q01362 244 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 DAG1Q14118 895 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 RAB39AQ14964 217 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 TRIM71Q2Q1W2 868 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 CEP78Q5JTW2 689 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 PSRC1Q6PGN9 363 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 SIX5Q8N196 739 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 SLC43A3Q8NBI5 491 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 CENPIQ92674 756 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 MOCOSQ96EN8 888 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 PPP3R2Q96LZ3 170 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 SMPD4Q9NXE4 827 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 ACTR3BQ9P1U1 418 aa11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 CRNNQ9UBG3 495 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 SAMHD1Q9Y3Z3 626 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-201ENST00000266546 ANKRD12Q6UB98 2062 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 CBX4O00257 560 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 LRIG2O94898 1065 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 RHOQP17081 205 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 ITGB6P18564 788 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 ATP6V0D1P61421 351 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 NCF4Q15080 339 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 PTPRNQ16849 979 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 CLLU1OSQ5K130 101 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 TMEM53Q6P2H8 277 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF621Q6ZSS3 439 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 GLT6D1Q7Z4J2 308 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 MYDGFQ969H8 173 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 PHF21AQ96BD5 680 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 REXO5Q96IC2 774 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 RPRD1BQ9NQG5 326 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 RASSF1Q9NS23 344 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 SPASTQ9UBP0 616 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF221Q9UK13 617 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 CNOT11Q9UKZ1 510 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 TMCC3Q9ULS5 477 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 TLR6Q9Y2C9 796 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 TPRP12270 2363 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 PRR23AA6NEV1 266 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 TBX1O43435 398 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 PIRTP0C851 137 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 SOAT1P35610 550 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 SLC1A2P43004 574 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 YBEYP58557 167 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 COPZ1P61923 177 aa11.4□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF33AQ06730 810 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms