RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 KERAO60938 352 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 OCM2P0CE71 109 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 OCMP0CE72 109 aaPredicted RBP16.59■□□□□ 0.25
SQLE-201ENST00000265896 GKP32189 559 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 KPNA1P52294 538 aaPredicted RBP16.59■□□□□ 0.25
SQLE-201ENST00000265896 PHEXP78562 749 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 BNIP2Q12982 314 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 TUSC3Q13454 348 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 SERINC3Q13530 473 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 PCBP1Q15365 356 aaKnown RBP eCLIP16.59■□□□□ 0.259e-7■■□□□ 12.7
SQLE-201ENST00000265896 TGFBIQ15582 683 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 GCNT7Q6ZNI0 430 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 GPRIN3Q6ZVF9 776 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 TRPV1Q8NER1 839 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 GABPB2Q8TAK5 448 aaPredicted RBP16.59■□□□□ 0.25
SQLE-201ENST00000265896 BRSK1Q8TDC3 778 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 KIAA1191Q96A73 305 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 SLC6A13Q9NSD5 602 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 AFF4Q9UHB7 1163 aaKnown RBP16.59■□□□□ 0.25
SQLE-201ENST00000265896 RALGAPA2Q2PPJ7 1873 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 ZNF236Q9UL36 1845 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 GSTA4O15217 222 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 BNIP3LO60238 219 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 HS6ST1O60243 411 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 MITFO75030 526 aaPredicted RBP16.59■□□□□ 0.25
SQLE-201ENST00000265896 SLC6A4P31645 630 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 TGFBR1P36897 503 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 ARSFP54793 590 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 ZNF33AQ06730 810 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 NFATC3Q12968 1075 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 AP5B1Q2VPB7 878 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 HACD2Q6Y1H2 254 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 SPRED1Q7Z699 444 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 MON1AQ86VX9 555 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 PARK7Q99497 189 aaKnown RBP16.59■□□□□ 0.25
SQLE-201ENST00000265896 TBC1D23Q9NUY8 699 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 PCDHGA11Q9Y5H2 935 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 H0YJX3 145 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 CHEK2O96017 543 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 FGF4P08620 206 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 ALPIP09923 528 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 RPL9P32969 192 aaKnown RBP16.59■□□□□ 0.25
SQLE-201ENST00000265896 CCDC81Q6ZN84 652 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 RBM23Q86U06 439 aaKnown RBP16.59■□□□□ 0.25
SQLE-201ENST00000265896 ZNF683Q8IZ20 524 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 CENPSQ8N2Z9 138 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 PSD4Q8NDX1 1056 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 CNIH3Q8TBE1 160 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 SLC39A13Q96H72 371 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 CCDC138Q96M89 665 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 ZNF599Q96NL3 588 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 BOCQ9BWV1 1114 aa16.59■□□□□ 0.25
SQLE-201ENST00000265896 TRMT6Q9UJA5 497 aaKnown RBP16.59■□□□□ 0.25
SQLE-201ENST00000265896 SNAP91O60641 907 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 NOL3O60936 208 aaKnown RBP16.58■□□□□ 0.24
SQLE-201ENST00000265896 E2F6O75461 281 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 INMTO95050 263 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 LRATO95237 230 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 RPL17P18621 184 aaKnown RBP16.58■□□□□ 0.24
SQLE-201ENST00000265896 HMOX2P30519 316 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 GALNT1Q10472 559 aaPredicted RBP16.58■□□□□ 0.24
SQLE-201ENST00000265896 DUSP4Q13115 394 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 SPCS2Q15005 226 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 MAPK11Q15759 364 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 FAM174BQ3ZCQ3 159 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 TAF2Q6P1X5 1199 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 FRA10AC1Q70Z53 315 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 DENND1CQ8IV53 801 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 BIRC8Q96P09 236 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 ACTL8Q9H568 366 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 POLE4Q9NR33 117 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 TMEM248Q9NWD8 314 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 SMPD4Q9NXE4 827 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 LEF1Q9UJU2 399 aaPredicted RBP16.58■□□□□ 0.24
SQLE-201ENST00000265896 PCDHB3Q9Y5E6 796 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 ZFP37Q9Y6Q3 630 aaPredicted RBP16.58■□□□□ 0.24
SQLE-201ENST00000265896 H0Y626 953 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 CELF2O95319 508 aaKnown RBP16.58■□□□□ 0.24
SQLE-201ENST00000265896 TRIM16O95361 564 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 ESRRBO95718 433 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 CCNA2P20248 432 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 ZNF135P52742 658 aaPredicted RBP16.58■□□□□ 0.24
SQLE-201ENST00000265896 FAM171A1Q5VUB5 890 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 TMEM179BQ7Z7N9 219 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 OR4F6Q8NGB9 312 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 SLC22A17Q8WUG5 538 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 DUS3LQ96G46 650 aaKnown RBP16.58■□□□□ 0.24
SQLE-201ENST00000265896 BARD1Q99728 777 aaKnown RBP16.58■□□□□ 0.24
SQLE-201ENST00000265896 TM6SF2Q9BZW4 377 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 CIDEBQ9UHD4 219 aa16.58■□□□□ 0.24
SQLE-201ENST00000265896 CAPN15O75808 1086 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 PRKD3O94806 890 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 CST1P01037 141 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 CBX3Q13185 183 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 PRKG2Q13237 762 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 SIM2Q14190 667 aaPredicted RBP16.57■□□□□ 0.24
SQLE-201ENST00000265896 CTU2Q2VPK5 515 aaKnown RBP16.57■□□□□ 0.24
SQLE-201ENST00000265896 ARMC12Q5T9G4 340 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 EGFLAMQ63HQ2 1017 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 GRAMD4Q6IC98 578 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms