RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 KHDC1Q4VXA5 237 aaKnown RBP17.82■□□□□ 0.44
COL5A3-201ENST00000264828 METTL3Q86U44 580 aaKnown RBP17.82■□□□□ 0.44
COL5A3-201ENST00000264828 SLC4A11Q8NBS3 891 aa17.82■□□□□ 0.44
COL5A3-201ENST00000264828 NMUR1Q9HB89 426 aa17.82■□□□□ 0.44
COL5A3-201ENST00000264828 TMEM27Q9HBJ8 222 aa17.82■□□□□ 0.44
COL5A3-201ENST00000264828 ANXA4P09525 319 aaPredicted RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 FUT4P22083 530 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 CES1P23141 567 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 SPATA22Q8NHS9 363 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TNFAIP8L1Q8WVP5 186 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 OXCT2Q9BYC2 517 aaPredicted RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 SNX10Q9Y5X0 201 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TBC1D3DA0A087WVF3 549 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TBC1D3IA0A087WXS9 549 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TBC1D3EA0A087X179 549 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TBC1D3KA0A087X1G2 549 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TBC1D3FA6NER0 549 aaPredicted RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TBC1D3LB9A6J9 549 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TBC1D3HP0C7X1 549 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 NMBRP28336 390 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 ACTR3P61158 418 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 MAP2K5Q13163 448 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 NAE1Q13564 534 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TBC1D3GQ6DHY5 549 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TBC1D3CQ6IPX1 549 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 ADGRD1Q6QNK2 874 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 SMARCD3Q6STE5 483 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TBC1D3Q8IZP1 549 aaPredicted RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 OR10A6Q8NH74 314 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 NKD1Q969G9 470 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 SIPA1Q96FS4 1042 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 FAM129BQ96TA1 746 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 AGAP2Q99490 1192 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 DKK3Q9UBP4 350 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 A0A1W2PQ72 361 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 CRYBB1P53674 252 aaPredicted RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 RTP1P59025 263 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 ELP6Q0PNE2 266 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 DUSP4Q13115 394 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 BMT2Q1RMZ1 405 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 SIDT2Q8NBJ9 832 aaKnown RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 LHX5Q9H2C1 402 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 GULP1Q9UBP9 304 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 SHPRHQ149N8 1683 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 SPATA31C2B4DYI2 1134 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TSPAN4O14817 238 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 ATG13O75143 517 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 PPP1R15BQ5SWA1 713 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 FAM46CQ5VWP2 391 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 PYROXD2Q8N2H3 581 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 PLD5Q8N7P1 536 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 SETD6Q8TBK2 473 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 NODALQ96S42 347 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 PTPN18Q99952 460 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 WASF2Q9Y6W5 498 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 H3BM21 787 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 KLF1Q13351 362 aaPredicted RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 CES5AQ6NT32 575 aa17.81■□□□□ 0.44
COL5A3-201ENST00000264828 CIR1Q86X95 450 aaPredicted RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 TTC29Q8NA56 475 aaPredicted RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 C12orf50Q8NA57 414 aaPredicted RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 POP5Q969H6 163 aaKnown RBP17.81■□□□□ 0.44
COL5A3-201ENST00000264828 RIIAD1A6NNX1 92 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 PIP5K1BO14986 540 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 IFNW1P05000 195 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 ARF4P18085 180 aaPredicted RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 AIF1P55008 147 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 TNFAIP8L3Q5GJ75 292 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 ZNF615Q8N8J6 731 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 ING5Q8WYH8 240 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 MFSD3Q96ES6 412 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 ELAC1Q9H777 363 aaKnown RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 BAIAP2Q9UQB8 552 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 OR2AG2A6NM03 316 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 PRMT5O14744 637 aaPredicted RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 TPD52L2O43399 206 aaKnown RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 ITGB5P18084 799 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 PTPN9P43378 593 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 LARS2Q15031 903 aaKnown RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 SWT1Q5T5J6 900 aaKnown RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 MON1BQ7L1V2 547 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 C8orf4Q9NR00 106 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 PHF24Q9UPV7 400 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 MFSD5Q6N075 450 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 ESRP1Q6NXG1 681 aaKnown RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 STRADAQ7RTN6 431 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 TTYH1Q9H313 450 aaPredicted RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 CXorf21Q9HAI6 301 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 PCDHB1Q9Y5F3 818 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 ATRNO75882 1429 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 CCNB2O95067 398 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 STBD1O95210 358 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 SNX4O95219 450 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 UGT2B4P06133 528 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 CORO1AP31146 461 aaKnown RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 RGS8P57771 180 aaPredicted RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 TMEM214Q6NUQ4 689 aaKnown RBP17.8■□□□□ 0.44
COL5A3-201ENST00000264828 ZMIZ2Q8NF64 920 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 TBATAQ96M53 351 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms