RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 PTPRJQ12913 1337 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 C9IYK1 514 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 QSOX1O00391 747 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 RLN2P04090 185 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 EPHX1P07099 455 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 YAP1P46937 504 aaKnown RBP12.74□□□□□ -0.37
TTC39A-202ENST00000262676 GJA9P57773 515 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 ADAM8P78325 824 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 TLR1Q15399 786 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 QSOX2Q6ZRP7 698 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 TMEM86AQ8N2M4 240 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 C12orf50Q8NA57 414 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-202ENST00000262676 DNASE1L2Q92874 299 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 MRPS17Q9Y2R5 130 aaKnown RBP12.74□□□□□ -0.37
TTC39A-202ENST00000262676 MAP4K5Q9Y4K4 846 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 A0A0A0MRY4 1105 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 FABP12A6NFH5 140 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 TNFRSF11BO00300 401 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 TTPAP49638 278 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 RGS19P49795 217 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 OR2B6P58173 313 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 SMARCB1Q12824 385 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 C9orf64Q5T6V5 341 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 GLYATQ6IB77 296 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 ALLCQ8N6M5 410 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 SPATA13Q96N96 652 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 RBM4BQ9BQ04 359 aaKnown RBP12.74□□□□□ -0.37
TTC39A-202ENST00000262676 RBM4Q9BWF3 364 aaKnown RBP12.74□□□□□ -0.37
TTC39A-202ENST00000262676 SLCO1B3Q9NPD5 702 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 OSER1Q9NX31 292 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 SEC14L3Q9UDX4 400 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 DDX3XO00571 662 aaKnown RBP eCLIP12.74□□□□□ -0.37
TTC39A-202ENST00000262676 FPGTO14772 594 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 PPEF2O14830 753 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 LDOC1O95751 146 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-202ENST00000262676 NRIP1P48552 1158 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 CSTF1Q05048 431 aaKnown RBP12.74□□□□□ -0.37
TTC39A-202ENST00000262676 RAB30Q15771 203 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 OR2L8Q8NGY9 312 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 OR14C36Q8NHC7 312 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
TTC39A-202ENST00000262676 ATPIF1Q9UII2 106 aa12.74□□□□□ -0.37
TTC39A-202ENST00000262676 REXO2Q9Y3B8 237 aaKnown RBP12.74□□□□□ -0.37
TTC39A-202ENST00000262676 LOC100509620A0A075B734 347 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 MATN4O95460 622 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 UROSP10746 265 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 TIGD2Q4W5G0 525 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 NIPA1Q7RTP0 329 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 KATNAL2Q8IYT4 538 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 LENG9Q96B70 501 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 VAT1Q99536 393 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 SNX15Q9NRS6 342 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 ABCC13Q9NSE7 274 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 AASSQ9UDR5 926 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 MEMO1Q9Y316 297 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 FAM149AA5PLN7 773 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 ANXA2P2A6NMY6 339 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 HDAC3O15379 428 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 ANGPTL1O95841 491 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 ANXA2P07355 339 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 TUBG1P23258 451 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 PTX3P26022 381 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 MAT2AP31153 395 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 S100A12P80511 92 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 PLPPR4Q7Z2D5 763 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 CHERPQ8IWX8 916 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 GPR135Q8IZ08 494 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 UBR7Q8N806 425 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 GTPBP3Q969Y2 492 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 C3orf14Q9HBI5 128 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 MAGEE1Q9HCI5 957 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 OR12D3Q9UGF7 316 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 TRBC1P01850 177 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 HOXB8P17481 243 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 C2orf27AQ580R0 203 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 CPTPQ5TA50 214 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 P2RY8Q86VZ1 359 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 CREG2Q8IUH2 290 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 PHC2Q8IXK0 858 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 CMTR2Q8IYT2 770 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 GALNT15Q8N3T1 639 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 CDT1Q9H211 546 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 ZNF490Q9ULM2 529 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 RIIAD1A6NNX1 92 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 MAFO75444 373 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 CCNB1P14635 433 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 TOB1P50616 345 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 ZNF132P52740 706 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 GDF6Q6KF10 455 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 SMARCD3Q6STE5 483 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 UBE2R2Q712K3 238 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 YTHDF3Q7Z739 585 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 INO80EQ8NBZ0 244 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 ADCY4Q8NFM4 1077 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 PCDH19Q8TAB3 1148 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 HDAC2Q92769 488 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 GPR20Q99678 358 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 METTL8Q9H825 291 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 MOV10Q9HCE1 1003 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms