RNA–Protein interactions for RNA: ENST00000262428.4

COTL1-201, Transcript of coactosin like F-actin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COTL1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-201ENST00000262428 KLK6Q92876 244 aa16.3■□□□□ 0.2
COTL1-201ENST00000262428 GRAMD1AQ96CP6 724 aa16.3■□□□□ 0.2
COTL1-201ENST00000262428 COX14Q96I36 57 aa16.3■□□□□ 0.2
COTL1-201ENST00000262428 LENG8Q96PV6 779 aaPredicted RBP16.3■□□□□ 0.2
COTL1-201ENST00000262428 KDM4CQ9H3R0 1056 aa16.3■□□□□ 0.2
COTL1-201ENST00000262428 TRIM39Q9HCM9 518 aa16.3■□□□□ 0.2
COTL1-201ENST00000262428 POLMQ9NP87 494 aaPredicted RBP16.3■□□□□ 0.2
COTL1-201ENST00000262428 ITM2CQ9NQX7 267 aa16.3■□□□□ 0.2
COTL1-201ENST00000262428 MBNL1Q9NR56 388 aaKnown RBP16.3■□□□□ 0.2
COTL1-201ENST00000262428 THAP1Q9NVV9 213 aa16.3■□□□□ 0.2
COTL1-201ENST00000262428 CCDC189A1A4V9 331 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 NPEPPSL1A6NEC2 478 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 FAM170BA6NMN3 283 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 QSOX1O00391 747 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 BTN3A1O00481 513 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 SNX3O60493 162 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 KERAO60938 352 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 H2AFYO75367 372 aaKnown RBP16.29■□□□□ 0.2
COTL1-201ENST00000262428 PCCBP05166 539 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 MTHFD2P13995 350 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 SLC1A6P48664 564 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 RGS4P49798 205 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 DGKEP52429 567 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 DNAJB13P59910 316 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 SGCGQ13326 291 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 GBX1Q14549 363 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 UBXN2BQ14CS0 331 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 CYHR1Q6ZMK1 362 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 ATG14Q6ZNE5 492 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 PIWIL4Q7Z3Z4 852 aaKnown RBP16.29■□□□□ 0.2
COTL1-201ENST00000262428 FUBP1Q96AE4 644 aaKnown RBP16.29■□□□□ 0.2
COTL1-201ENST00000262428 CCDC126Q96EE4 140 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 HIC2Q96JB3 615 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 C7orf26Q96N11 449 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 NELL2Q99435 816 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 SLC17A9Q9BYT1 436 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 EPHX3Q9H6B9 360 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 EBF1Q9UH73 591 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 OR2AG2A6NM03 316 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 A8MT66 165 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 CDK14O94921 469 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 FTH1P02794 183 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 CBSLP0DN79 551 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 CBSP35520 551 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 PRLHRP49683 370 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 NAGLUP54802 743 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 SF3A3Q12874 501 aaKnown RBP eCLIP16.29■□□□□ 0.2
COTL1-201ENST00000262428 GKAP1Q5VSY0 366 aaPredicted RBP16.29■□□□□ 0.2
COTL1-201ENST00000262428 TMEM220Q6QAJ8 160 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 SIX5Q8N196 739 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 BEND7Q8N7W2 519 aaPredicted RBP16.29■□□□□ 0.2
COTL1-201ENST00000262428 HMGB4Q8WW32 186 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 MOCOSQ96EN8 888 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 SEC16BQ96JE7 1060 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 FOXQ1Q9C009 403 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 C2orf42Q9NWW7 574 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 ATXN10Q9UBB4 475 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 RNF112Q9ULX5 631 aa16.29■□□□□ 0.2
COTL1-201ENST00000262428 ANKRD12Q6UB98 2062 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 KPNA5O15131 536 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 ATG13O75143 517 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 LYPLA1O75608 230 aaPredicted RBP16.28■□□□□ 0.2
COTL1-201ENST00000262428 IPO13O94829 963 aaKnown RBP16.28■□□□□ 0.2
COTL1-201ENST00000262428 TPBGLP0DKB5 382 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 TEAD1P28347 426 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 ARRB2P32121 409 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 ACSL1P33121 698 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 ABCE1P61221 599 aaKnown RBP16.28■□□□□ 0.2
COTL1-201ENST00000262428 ASPHQ12797 758 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 OVGP1Q12889 678 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 IRF4Q15306 451 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 PLEKHS1Q5SXH7 462 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 TRIM67Q6ZTA4 783 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 HEATR4Q86WZ0 1026 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 ASB12Q8WXK4 309 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 TEX101Q9BY14 249 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 ZCCHC2Q9C0B9 1178 aaKnown RBP16.28■□□□□ 0.2
COTL1-201ENST00000262428 OR2AG1Q9H205 316 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 CYP4F12Q9HCS2 524 aa16.28■□□□□ 0.2
COTL1-201ENST00000262428 USP36Q9P275 1121 aaKnown RBP16.28■□□□□ 0.2
COTL1-201ENST00000262428 TSR3Q9UJK0 312 aaKnown RBP16.28■□□□□ 0.2
COTL1-201ENST00000262428 TMEM114B3SHH9 223 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 UBXN8O00124 270 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 EIF3FO00303 357 aaPredicted RBP16.27■□□□□ 0.2
COTL1-201ENST00000262428 RAD51BO15315 384 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 VEGFDO43915 354 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 LILRB5O75023 590 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 SMIM24O75264 130 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 TRIM23P36406 574 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 PPP2CBP62714 309 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 PPP2CAP67775 309 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 CDK3Q00526 305 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 NFKB2Q00653 900 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 INPP5AQ14642 412 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 BCL7AQ4VC05 210 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 SPATA21Q7Z572 469 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 SLC22A9Q8IVM8 553 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 UBALD2Q8IYN6 164 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 MYO1HQ8N1T3 1032 aa16.27■□□□□ 0.2
COTL1-201ENST00000262428 EXT2Q93063 718 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms