RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MAGEA8P43361 318 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 RGRP47804 291 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 NEK2P51955 445 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 OXCT1P55809 520 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 CYP4F2P78329 520 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 CYP4F3Q08477 520 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 TP53BP2Q13625 1128 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 CCNYL2Q5T2Q4 361 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 KDELC1Q6UW63 502 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 RPRD1AQ96P16 312 aaPredicted RBP12.84□□□□□ -0.35
SNX1-201ENST00000261889 AFF4Q9UHB7 1163 aaKnown RBP12.84□□□□□ -0.35
SNX1-201ENST00000261889 SLCO3A1Q9UIG8 710 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNX1-201ENST00000261889 GPR45Q9Y5Y3 372 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 RANBP2P49792 3224 aaKnown RBP12.84□□□□□ -0.35
SNX1-201ENST00000261889 IRAK2O43187 625 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 LDB2O43679 373 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 COQ9O75208 318 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 CLPXO76031 633 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 CAPN1P07384 714 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 MMP2P08253 660 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 WARSP23381 471 aaKnown RBP12.84□□□□□ -0.35
SNX1-201ENST00000261889 JAK1P23458 1154 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 CCNCP24863 283 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 LEPRP48357 1165 aaKnown RBP12.84□□□□□ -0.35
SNX1-201ENST00000261889 KPNA2P52292 529 aaKnown RBP12.84□□□□□ -0.35
SNX1-201ENST00000261889 RPL38P63173 70 aaKnown RBP12.84□□□□□ -0.35
SNX1-201ENST00000261889 ZXDBP98169 803 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 INAVAQ3KP66 663 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 PM20D1Q6GTS8 502 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 LCN8Q6JVE9 175 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 LETMD1Q6P1Q0 360 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 LINGO4Q6UY18 593 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 RAB44Q7Z6P3 723 aaPredicted RBP12.84□□□□□ -0.35
SNX1-201ENST00000261889 MFSD2AQ8NA29 543 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 OR13F1Q8NGS4 319 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 PROKR1Q8TCW9 393 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 SMARCD1Q96GM5 515 aa12.84□□□□□ -0.35
SNX1-201ENST00000261889 SDR39U1Q9NRG7 319 aaPredicted RBP12.84□□□□□ -0.35
SNX1-201ENST00000261889 SYCE1LA8MT33 242 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SLC22A2O15244 555 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 RPL34P49207 117 aaKnown RBP12.83□□□□□ -0.36
SNX1-201ENST00000261889 CLCN5P51795 746 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 HK3P52790 923 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 BTG3Q14201 252 aaPredicted RBP12.83□□□□□ -0.36
SNX1-201ENST00000261889 FAM214AQ32MH5 1076 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SLC39A12Q504Y0 691 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 INTS11Q5TA45 600 aaKnown RBP12.83□□□□□ -0.36
SNX1-201ENST00000261889 SCD5Q86SK9 330 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 ATAD1Q8NBU5 361 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 OR7D4Q8NG98 312 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 MAGED4Q96JG8 741 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 PARK7Q99497 189 aaKnown RBP12.83□□□□□ -0.36
SNX1-201ENST00000261889 TRIM15Q9C019 465 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 ARL5CA6NH57 179 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 G3V2T6 193 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 hCG_2039718K7EN88 272 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 PSMD11O00231 422 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 GPR182O15218 404 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 CBFA2T3O75081 653 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SLC2A4P14672 509 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 PBX3P40426 434 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SF1Q15637 639 aaKnown RBP12.83□□□□□ -0.36
SNX1-201ENST00000261889 ARMC12Q5T9G4 340 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 LAIR1Q6GTX8 287 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 PSAPL1Q6NUJ1 521 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 TAS2R42Q7RTR8 314 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 CROCCP3Q8IVE0 287 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SFRP1Q8N474 314 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 METTL6Q8TCB7 284 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 FEM1CQ96JP0 617 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 VAT1Q99536 393 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 RMI1Q9H9A7 625 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 NOD1Q9Y239 953 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 TMA7Q9Y2S6 64 aaKnown RBP12.83□□□□□ -0.36
SNX1-201ENST00000261889 A0A1W2PP18 115 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 UPK1AO00322 258 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 ZNF682O95780 498 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 THP07101 528 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 MBL2P11226 248 aaPredicted RBP12.83□□□□□ -0.36
SNX1-201ENST00000261889 TCEA1P23193 301 aaKnown RBP12.83□□□□□ -0.36
SNX1-201ENST00000261889 AQP1P29972 269 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 HLCSP50747 726 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SCAPQ12770 1279 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SREBF2Q12772 1141 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SF3B4Q15427 424 aaKnown RBP eCLIP12.83□□□□□ -0.36
SNX1-201ENST00000261889 INAQ16352 499 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 BROXQ5VW32 411 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 NEK10Q6ZWH5 1172 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SPATC1Q76KD6 591 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SPRED1Q7Z699 444 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 ZDHHC13Q8IUH4 622 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 SLC22A9Q8IVM8 553 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 CLDN19Q8N6F1 224 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 MRPL40Q9NQ50 206 aaKnown RBP12.83□□□□□ -0.36
SNX1-201ENST00000261889 ABCD2Q9UBJ2 740 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 MTRRQ9UBK8 725 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 ADGRE2Q9UHX3 823 aa12.83□□□□□ -0.36
SNX1-201ENST00000261889 AQP12BA6NM10 295 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 PAPSS2O95340 614 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms