RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CACNG4Q9UBN1 327 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 ATP6V1HQ9UI12 483 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 SSR3Q9UNL2 185 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 PRELID1Q9Y255 219 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 TIAM2Q8IVF5 1701 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 PRSS51A0A1B0GVH4 220 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 H0YC42 278 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 SUV39H1O43463 412 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 RGS20O76081 388 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 CHRM5P08912 532 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-201ENST00000261646 SLC35E2BP0CK96 405 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 PKMP14618 531 aaKnown RBP16.04■□□□□ 0.16
SREBF1-201ENST00000261646 MYF6P23409 242 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 OPRL1P41146 370 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 BNC1Q01954 994 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 HSPA14Q0VDF9 509 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 CDH18Q13634 790 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 CYP4Z1Q86W10 505 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 SLC13A3Q8WWT9 602 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 DIRAS2Q96HU8 199 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 RPL10LQ96L21 214 aaKnown RBP16.04■□□□□ 0.16
SREBF1-201ENST00000261646 PCDHGA7Q9Y5G6 932 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 COL18A1P39060 1754 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 FAM234BA2RU67 622 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 MATN3O15232 486 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 RASAL1O95294 804 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 FGF1P05230 155 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 IRF8Q02556 426 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 PLEKHG6Q3KR16 790 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 ZNF404Q494X3 552 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 EPHX4Q8IUS5 362 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 MYLPFQ96A32 169 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 CDK15Q96Q40 435 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 MRPS7Q9Y2R9 242 aaKnown RBP16.04■□□□□ 0.16
SREBF1-201ENST00000261646 A8MV72 311 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-201ENST00000261646 PDHXO00330 501 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 SLC28A1O00337 649 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 B4GAT1O43505 415 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 PSIP1O75475 530 aaKnown RBP16.03■□□□□ 0.16
SREBF1-201ENST00000261646 SNX4O95219 450 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 ANXA5P08758 320 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 BMP2P12643 396 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 PROZP22891 400 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 ERVK-8P63133 956 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 SCN1BQ07699 218 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 PTCHD4Q6ZW05 846 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 IGFN1Q86VF2 1251 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 SCML4Q8N228 414 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 TMEM86AQ8N2M4 240 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 KDM1BQ8NB78 822 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 NACC2Q96BF6 587 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 TUBA1CQ9BQE3 449 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 NAA50Q9GZZ1 169 aaKnown RBP16.03■□□□□ 0.16
SREBF1-201ENST00000261646 IRF2BPLQ9H1B7 796 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 LRTM1Q9HBL6 345 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 GALPQ9UBC7 116 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 A0A1W2PQ72 361 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 PPEF2O14830 753 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 RPLP0P05388 317 aaKnown RBP16.03■□□□□ 0.16
SREBF1-201ENST00000261646 SMIM18P0DKX4 95 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 MBL2P11226 248 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-201ENST00000261646 DGKAP23743 735 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 CNTN1Q12860 1018 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 TIGD6Q17RP2 521 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 STEAP4Q687X5 459 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 CLIP4Q8N3C7 705 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 GRPEL2Q8TAA5 225 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 MED8Q96G25 268 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 FBXW11Q9UKB1 542 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 ZNF490Q9ULM2 529 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-201ENST00000261646 SPEF1Q9Y4P9 236 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 C17orf102A2RUQ5 167 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 SLC7A4O43246 635 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 GOT2P00505 430 aaKnown RBP16.03■□□□□ 0.16
SREBF1-201ENST00000261646 IFI30P13284 250 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 GPC1P35052 558 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 RFC2P35250 354 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 TUFMP49411 452 aaKnown RBP16.03■□□□□ 0.16
SREBF1-201ENST00000261646 SULT1C3Q6IMI6 304 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 STK40Q8N2I9 435 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 TFAP2CQ92754 450 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 APOLD1Q96LR9 279 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 SLC9A7Q96T83 725 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 SLC25A51Q9H1U9 297 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 ASB8Q9H765 288 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
SREBF1-201ENST00000261646 MARCH2Q9P0N8 246 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 ZNF222Q9UK12 451 aa16.03■□□□□ 0.16
SREBF1-201ENST00000261646 MARF1Q9Y4F3 1742 aaKnown RBP16.03■□□□□ 0.16
SREBF1-201ENST00000261646 RPP40O75818 363 aaKnown RBP16.02■□□□□ 0.16
SREBF1-201ENST00000261646 HSPA7P48741 367 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 NFE2Q16621 373 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-201ENST00000261646 NEK10Q6ZWH5 1172 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 TMEM135Q86UB9 458 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 RASAL3Q86YV0 1011 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 CHERPQ8IWX8 916 aaKnown RBP16.02■□□□□ 0.16
SREBF1-201ENST00000261646 TCAIMQ8N3R3 496 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 OR8H1Q8NGG4 311 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 LPPQ93052 612 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 ZFP42Q96MM3 310 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms