RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 SPATA20Q8TB22 786 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 SORCS1Q8WY21 1168 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 NR1H4Q96RI1 486 aaPredicted RBP4.82□□□□□ -1.64
TRA2B-201ENST00000259043 SERINC2Q96SA4 455 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 MMTAG2Q9BU76 263 aaKnown RBP4.82□□□□□ -1.64
TRA2B-201ENST00000259043 KRTAP4-4Q9BYR3 166 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 DDX4Q9NQI0 724 aaKnown RBP4.82□□□□□ -1.64
TRA2B-201ENST00000259043 SNTG1Q9NSN8 517 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 NKIRAS2Q9NYR9 191 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 KIAA1456Q9P272 454 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 PEMTQ9UBM1 199 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 MALT1Q9UDY8 824 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 SLCO3A1Q9UIG8 710 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 PSAT1Q9Y617 370 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 SAA2-SAA4A0A096LPE2 208 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 hDV102S1A0JD36 115 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 TTC36A6NLP5 189 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 B4DLN1 442 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 PRAC2D3DTV9 90 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 TNFSF14O43557 240 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 BUB3O43684 328 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 PTP4A3O75365 173 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 NDUFB4O95168 129 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 URODP06132 367 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 F7P08709 466 aaPredicted RBP4.81□□□□□ -1.64
TRA2B-201ENST00000259043 SLC2A4P14672 509 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 CHATP28329 748 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 PPP2R1AP30153 589 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 HNRNPH1P31943 449 aaKnown RBP4.81□□□□□ -1.64
TRA2B-201ENST00000259043 HOXD13P35453 343 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 PEX5P50542 639 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 EFNB1P98172 346 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 ECT2LQ008S8 904 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 RUNX2Q13950 521 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 MFSD4BQ5TF39 518 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 SERTAD4-AS1Q5TG53 156 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 ZC3HC1Q86WB0 502 aaKnown RBP4.81□□□□□ -1.64
TRA2B-201ENST00000259043 KIAA2013Q8IYS2 634 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 NAGSQ8N159 534 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 C1orf131Q8NDD1 294 aaKnown RBP4.81□□□□□ -1.64
TRA2B-201ENST00000259043 SPATA22Q8NHS9 363 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 KCNG4Q8TDN1 519 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 CREB3L4Q8TEY5 395 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 USP6NLQ92738 828 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 NSUN4Q96CB9 384 aaKnown RBP4.81□□□□□ -1.64
TRA2B-201ENST00000259043 OPTNQ96CV9 577 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 ZNF385AQ96PM9 386 aaKnown RBP4.81□□□□□ -1.64
TRA2B-201ENST00000259043 MPHOSPH8Q99549 860 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 LBHD1Q9BQE6 289 aaPredicted RBP4.81□□□□□ -1.64
TRA2B-201ENST00000259043 MXRA8Q9BRK3 442 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 USP44Q9H0E7 712 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 TTYH1Q9H313 450 aaPredicted RBP4.81□□□□□ -1.64
TRA2B-201ENST00000259043 MUC13Q9H3R2 512 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 NOX4Q9NPH5 578 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 DONSONQ9NYP3 566 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 IL1RAPL1Q9NZN1 696 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 CDH23Q9H251 3354 aa4.81□□□□□ -1.64
TRA2B-201ENST00000259043 DDX60LQ5H9U9 1706 aaKnown RBP4.8□□□□□ -1.64
TRA2B-201ENST00000259043 WDR81Q562E7 1941 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 MYO3BQ8WXR4 1341 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 TEX13CA0A0J9YWL9 993 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 CLRN2A0PK11 232 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 NPIPB15A6NHN6 443 aaPredicted RBP4.8□□□□□ -1.64
TRA2B-201ENST00000259043 ZIC3O60481 467 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 NDUFS7O75251 213 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 KDM4BO94953 1096 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 CLDN14O95500 239 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 PLGP00747 810 aaPredicted RBP4.8□□□□□ -1.64
TRA2B-201ENST00000259043 LINC00271P0C7V0 271 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 PCNAP12004 261 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 CCL5P13501 91 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 NFKBIAP25963 317 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 HDAC4P56524 1084 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 GOLGA8DPQ0D2H9 430 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 WTAPQ15007 396 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 OASLQ15646 514 aaKnown RBP4.8□□□□□ -1.64
TRA2B-201ENST00000259043 CALCRLQ16602 461 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 LRIT3Q3SXY7 679 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 PPP6R3Q5H9R7 873 aaPredicted RBP4.8□□□□□ -1.64
TRA2B-201ENST00000259043 SMIM29Q86T20 159 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 C11orf65Q8NCR3 313 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 OTULINQ96BN8 352 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 KLHL29Q96CT2 875 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 PRMT6Q96LA8 375 aaPredicted RBP4.8□□□□□ -1.64
TRA2B-201ENST00000259043 GUCD1Q96NT3 240 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 CSF3RQ99062 836 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 ITPAQ9BY32 194 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 SPRY4Q9C004 299 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 COA1Q9GZY4 146 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 PRKRIP1Q9H875 184 aaPredicted RBP4.8□□□□□ -1.64
TRA2B-201ENST00000259043 EBF2Q9HAK2 575 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 SMYD2Q9NRG4 433 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 SEPT11Q9NVA2 429 aaKnown RBP4.8□□□□□ -1.64
TRA2B-201ENST00000259043 BABAM1Q9NWV8 329 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 HCFC1R1Q9NWW0 138 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 CISD1Q9NZ45 108 aaKnown RBP4.8□□□□□ -1.64
TRA2B-201ENST00000259043 SMARCAL1Q9NZC9 954 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 EHD2Q9NZN4 543 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 TBC1D29Q9UFV1 150 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms