RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 METTL6Q8TCB7 284 aa15.05■□□□□ -0
DDX56-201ENST00000258772 NSMCE2Q96MF7 247 aa15.05■□□□□ -0
DDX56-201ENST00000258772 ADGRE3Q9BY15 652 aa15.05■□□□□ -0
DDX56-201ENST00000258772 HIPK3Q9H422 1215 aa15.05■□□□□ -0
DDX56-201ENST00000258772 CXorf21Q9HAI6 301 aa15.05■□□□□ -0
DDX56-201ENST00000258772 HEBP1Q9NRV9 189 aa15.05■□□□□ -0
DDX56-201ENST00000258772 PCDHB3Q9Y5E6 796 aa15.05■□□□□ -0
DDX56-201ENST00000258772 A0A0U1RQS6 177 aa15.04■□□□□ -0
DDX56-201ENST00000258772 SLC38A8A6NNN8 435 aa15.04■□□□□ -0
DDX56-201ENST00000258772 IQCF5A8MTL0 148 aa15.04■□□□□ -0
DDX56-201ENST00000258772 CAPN1P07384 714 aa15.04■□□□□ -0
DDX56-201ENST00000258772 G6PDP11413 515 aa15.04■□□□□ -0
DDX56-201ENST00000258772 CST5P28325 142 aaPredicted RBP15.04■□□□□ -0
DDX56-201ENST00000258772 IL27RAQ6UWB1 636 aa15.04■□□□□ -0
DDX56-201ENST00000258772 PRR23BQ6ZRT6 265 aa15.04■□□□□ -0
DDX56-201ENST00000258772 LYSMD3Q7Z3D4 306 aa15.04■□□□□ -0
DDX56-201ENST00000258772 LRRC43Q8N309 656 aa15.04■□□□□ -0
DDX56-201ENST00000258772 PCSK9Q8NBP7 692 aaKnown RBP15.04■□□□□ -0
DDX56-201ENST00000258772 PPM1MQ96MI6 270 aa15.04■□□□□ -0
DDX56-201ENST00000258772 YTHDF1Q9BYJ9 559 aaKnown RBP15.04■□□□□ -0
DDX56-201ENST00000258772 ACTL8Q9H568 366 aa15.04■□□□□ -0
DDX56-201ENST00000258772 COMMD10Q9Y6G5 202 aa15.04■□□□□ -0
DDX56-201ENST00000258772 H7C0S8 307 aa15.04■□□□□ -0
DDX56-201ENST00000258772 ARNTLO00327 626 aa15.04■□□□□ -0
DDX56-201ENST00000258772 GJB5O95377 273 aa15.04■□□□□ -0
DDX56-201ENST00000258772 ESR1P03372 595 aa15.04■□□□□ -0
DDX56-201ENST00000258772 RHOCP08134 193 aa15.04■□□□□ -0
DDX56-201ENST00000258772 CDH1P12830 882 aa15.04■□□□□ -0
DDX56-201ENST00000258772 TTKP33981 857 aa15.04■□□□□ -0
DDX56-201ENST00000258772 ARL1P40616 181 aaPredicted RBP15.04■□□□□ -0
DDX56-201ENST00000258772 PTGER3P43115 390 aa15.04■□□□□ -0
DDX56-201ENST00000258772 STT3AP46977 705 aa15.04■□□□□ -0
DDX56-201ENST00000258772 HTR6P50406 440 aa15.04■□□□□ -0
DDX56-201ENST00000258772 GALK1P51570 392 aa15.04■□□□□ -0
DDX56-201ENST00000258772 CLCN7P51798 805 aa15.04■□□□□ -0
DDX56-201ENST00000258772 SELPLGQ14242 412 aa15.04■□□□□ -0
DDX56-201ENST00000258772 PLCL1Q15111 1095 aa15.04■□□□□ -0
DDX56-201ENST00000258772 TAS2R42Q7RTR8 314 aa15.04■□□□□ -0
DDX56-201ENST00000258772 TTC30BQ8N4P2 665 aa15.04■□□□□ -0
DDX56-201ENST00000258772 NTN4Q9HB63 628 aa15.04■□□□□ -0
DDX56-201ENST00000258772 NUDT4Q9NZJ9 180 aa15.04■□□□□ -0
DDX56-201ENST00000258772 PKD2L2Q9NZM6 624 aa15.04■□□□□ -0
DDX56-201ENST00000258772 MAGEL2Q9UJ55 1249 aa15.04■□□□□ -0
DDX56-201ENST00000258772 hCG_2014768A0A024R1R8 64 aa15.03■□□□□ -0
DDX56-201ENST00000258772 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.03■□□□□ -0
DDX56-201ENST00000258772 TBC1D4O60343 1298 aa15.03■□□□□ -0
DDX56-201ENST00000258772 ATF6P18850 670 aa15.03■□□□□ -0
DDX56-201ENST00000258772 SGSHP51688 502 aa15.03■□□□□ -0
DDX56-201ENST00000258772 SMARCB1Q12824 385 aa15.03■□□□□ -0
DDX56-201ENST00000258772 TRAF2Q12933 501 aa15.03■□□□□ -0
DDX56-201ENST00000258772 ZNF177Q13360 481 aaPredicted RBP15.03■□□□□ -0
DDX56-201ENST00000258772 PCBP2Q15366 365 aaKnown RBP eCLIP15.03■□□□□ -0
DDX56-201ENST00000258772 GPR162Q16538 588 aa15.03■□□□□ -0
DDX56-201ENST00000258772 C18orf21Q32NC0 220 aaPredicted RBP15.03■□□□□ -0
DDX56-201ENST00000258772 AARS2Q5JTZ9 985 aaKnown RBP15.03■□□□□ -0
DDX56-201ENST00000258772 CYP20A1Q6UW02 462 aa15.03■□□□□ -0
DDX56-201ENST00000258772 DTWD1Q8N5C7 304 aa15.03■□□□□ -0
DDX56-201ENST00000258772 LEMD2Q8NC56 503 aa15.03■□□□□ -0
DDX56-201ENST00000258772 RNF217Q8TC41 542 aa15.03■□□□□ -0
DDX56-201ENST00000258772 NUDT8Q8WV74 236 aa15.03■□□□□ -0
DDX56-201ENST00000258772 CDK5RAP1Q96SZ6 601 aaKnown RBP15.03■□□□□ -0
DDX56-201ENST00000258772 HBEGFQ99075 208 aa15.03■□□□□ -0
DDX56-201ENST00000258772 CGREF1Q99674 301 aa15.03■□□□□ -0
DDX56-201ENST00000258772 TTLL2Q9BWV7 592 aa15.03■□□□□ -0
DDX56-201ENST00000258772 OSBPL6Q9BZF3 934 aa15.03■□□□□ -0
DDX56-201ENST00000258772 NACA2Q9H009 215 aa15.03■□□□□ -0
DDX56-201ENST00000258772 RRAGCQ9HB90 399 aa15.03■□□□□ -0
DDX56-201ENST00000258772 CDH7Q9ULB5 785 aa15.03■□□□□ -0
DDX56-201ENST00000258772 H0YAE9 185 aa15.03■□□□□ -0
DDX56-201ENST00000258772 OR7A17O14581 309 aa15.03■□□□□ -0
DDX56-201ENST00000258772 ANKRD28O15084 1053 aa15.03■□□□□ -0
DDX56-201ENST00000258772 LSM1O15116 133 aaKnown RBP15.03■□□□□ -0
DDX56-201ENST00000258772 GPR39O43194 453 aa15.03■□□□□ -0
DDX56-201ENST00000258772 KLKB1P03952 638 aa15.03■□□□□ -0
DDX56-201ENST00000258772 ALDH2P05091 517 aa15.03■□□□□ -0
DDX56-201ENST00000258772 MTPNP58546 118 aa15.03■□□□□ -0
DDX56-201ENST00000258772 RAB39AQ14964 217 aa15.03■□□□□ -0
DDX56-201ENST00000258772 CRY1Q16526 586 aa15.03■□□□□ -0
DDX56-201ENST00000258772 TBC1D25Q3MII6 688 aa15.03■□□□□ -0
DDX56-201ENST00000258772 RTP2Q5QGT7 225 aa15.03■□□□□ -0
DDX56-201ENST00000258772 OTUD3Q5T2D3 398 aaPredicted RBP15.03■□□□□ -0
DDX56-201ENST00000258772 KCTD8Q6ZWB6 473 aa15.03■□□□□ -0
DDX56-201ENST00000258772 GOLGA7Q7Z5G4 137 aa15.03■□□□□ -0
DDX56-201ENST00000258772 OR4F6Q8NGB9 312 aa15.03■□□□□ -0
DDX56-201ENST00000258772 ZNF420Q8TAQ5 688 aaPredicted RBP15.03■□□□□ -0
DDX56-201ENST00000258772 LZICQ8WZA0 190 aa15.03■□□□□ -0
DDX56-201ENST00000258772 PDLIM5Q96HC4 596 aaKnown RBP15.03■□□□□ -0
DDX56-201ENST00000258772 DOK1Q99704 481 aa15.03■□□□□ -0
DDX56-201ENST00000258772 DCUN1D5Q9BTE7 237 aa15.03■□□□□ -0
DDX56-201ENST00000258772 P2RY12Q9H244 342 aa15.03■□□□□ -0
DDX56-201ENST00000258772 POLR1BQ9H9Y6 1135 aa15.03■□□□□ -0
DDX56-201ENST00000258772 MARCH5Q9NX47 278 aa15.03■□□□□ -0
DDX56-201ENST00000258772 TMEM161AQ9NX61 479 aa15.03■□□□□ -0
DDX56-201ENST00000258772 DHRS7Q9Y394 339 aa15.03■□□□□ -0
DDX56-201ENST00000258772 TNPO3Q9Y5L0 923 aaKnown RBP15.03■□□□□ -0
DDX56-201ENST00000258772 H0Y858 1186 aa15.02■□□□□ -0
DDX56-201ENST00000258772 UPK1AO00322 258 aa15.02■□□□□ -0
DDX56-201ENST00000258772 TULP3O75386 442 aa15.02■□□□□ -0
DDX56-201ENST00000258772 RSL1D1O76021 490 aaKnown RBP15.02■□□□□ -0
DDX56-201ENST00000258772 ATE1O95260 518 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms