RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 UGT1A1P22309 533 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 UGT1A4P22310 534 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 LHCGRP22888 699 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 PSMA3P25788 255 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 UGT1A3P35503 534 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 UGT1A5P35504 534 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 SPINT3P49223 89 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 RGS19P49795 217 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 SUOXP51687 545 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 PGGT1BP53609 377 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 CDKN2DP55273 166 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 XIAPP98170 497 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 CFAP157Q5JU67 520 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 RGS9BPQ6ZS82 235 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 DPPA4Q7L190 304 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 TRMT11Q7Z4G4 463 aaKnown RBP9.65□□□□□ -0.87
TTC1-201ENST00000231238 SPATA21Q7Z572 469 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 PIM3Q86V86 326 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 CRLF3Q8IUI8 442 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 RAB3IL1Q8TBN0 382 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 CXorf40AQ8TE69 158 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 SEC16BQ96JE7 1060 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 MEGF10Q96KG7 1140 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 PLEKHG4BQ96PX9 1271 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 COPS8Q99627 209 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 MRPL57Q9BQC6 102 aaKnown RBP9.65□□□□□ -0.87
TTC1-201ENST00000231238 WRAP53Q9BUR4 548 aaKnown RBP9.65□□□□□ -0.87
TTC1-201ENST00000231238 MRPL46Q9H2W6 279 aaKnown RBP9.65□□□□□ -0.87
TTC1-201ENST00000231238 C8orf33Q9H7E9 229 aaPredicted RBP9.65□□□□□ -0.87
TTC1-201ENST00000231238 POPDC3Q9HBV1 291 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 COPG2Q9UBF2 871 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 XPR1Q9UBH6 696 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 CD84Q9UIB8 345 aa9.65□□□□□ -0.87
TTC1-201ENST00000231238 GPR39O43194 453 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 MBTPS2O43462 519 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 OR1I1O60431 355 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 ADAM11O75078 769 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 SMIM24O75264 130 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 TRIM16O95361 564 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 SERPINE1P05121 402 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 C1SP09871 688 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 TFEBP19484 476 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 FDXRP22570 491 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 GRK2P25098 689 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 ACRV1P26436 265 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 SLC26A3P40879 764 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 SKIV2L2P42285 1042 aaKnown RBP9.64□□□□□ -0.87
TTC1-201ENST00000231238 RGS4P49798 205 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 PON2Q15165 354 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 GLIPR1L2Q4G1C9 344 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 SETMARQ53H47 684 aaPredicted RBP9.64□□□□□ -0.87
TTC1-201ENST00000231238 C2orf27AQ580R0 203 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 ZNF549Q6P9A3 640 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 ZCCHC23Q6ZST2 131 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 ERN2Q76MJ5 926 aaKnown RBP9.64□□□□□ -0.87
TTC1-201ENST00000231238 CLEC14AQ86T13 490 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 RALGPS2Q86X27 583 aaPredicted RBP9.64□□□□□ -0.87
TTC1-201ENST00000231238 SPATS2Q86XZ4 545 aaKnown RBP9.64□□□□□ -0.87
TTC1-201ENST00000231238 C10orf107Q8IVU9 208 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 NXPE1Q8N323 547 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 FSTL5Q8N475 847 aaPredicted RBP9.64□□□□□ -0.87
TTC1-201ENST00000231238 NKAPQ8N5F7 415 aaKnown RBP9.64□□□□□ -0.87
TTC1-201ENST00000231238 GPR26Q8NDV2 337 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 HEXDCQ8WVB3 486 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 EXT2Q93063 718 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 EID2BQ96D98 161 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 SGF29Q96ES7 293 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 THOC1Q96FV9 657 aaKnown RBP9.64□□□□□ -0.87
TTC1-201ENST00000231238 ACOX2Q99424 681 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 GPR21Q99679 349 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 PLCD4Q9BRC7 762 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 PHF7Q9BWX1 381 aaPredicted RBP9.64□□□□□ -0.87
TTC1-201ENST00000231238 TRIM55Q9BYV6 548 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 CDH19Q9H159 772 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 TMEM245Q9H330 911 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 KCNK12Q9HB15 430 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 SLCO1B3Q9NPD5 702 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 PRSS16Q9NQE7 514 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 KLHL14Q9P2G3 628 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 SARDHQ9UL12 918 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 EMCNQ9ULC0 261 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 PPM1HQ9ULR3 514 aa9.64□□□□□ -0.87
TTC1-201ENST00000231238 DOCK8Q8NF50 2099 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 RGSL1A5PLK6 1076 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 PABPN1LA6NDY0 278 aaKnown RBP9.63□□□□□ -0.87
TTC1-201ENST00000231238 WNT9AO14904 365 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 TRIM13O60858 407 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 EDF1O60869 148 aaKnown RBP9.63□□□□□ -0.87
TTC1-201ENST00000231238 NIPSNAP2O75323 286 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 HSPA4LO95757 839 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 ADRB3P13945 408 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 HNRNPLP14866 589 aaKnown RBP eCLIP9.63□□□□□ -0.872e-7■■□□□ 13.7
TTC1-201ENST00000231238 ITGB6P18564 788 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 MSH3P20585 1137 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 NTSR1P30989 418 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 MMP12P39900 470 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 ETV3P41162 512 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 NSG1P42857 185 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 LIG3P49916 1009 aa9.63□□□□□ -0.87
TTC1-201ENST00000231238 PRKAA2P54646 552 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms