RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 SERPINB10P48595 397 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 EIF2B2P49770 351 aaKnown RBP15.75■□□□□ 0.11
SF3A2-201ENST00000221494 GATMP50440 423 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 CDKN2DP55273 166 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 GNA12Q03113 381 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ACOX1Q15067 660 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 GEN1Q17RS7 908 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ZNF789Q5FWF6 425 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 TMEM53Q6P2H8 277 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 RPS27LQ71UM5 84 aaKnown RBP15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ZNF555Q8NEP9 628 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ZMIZ2Q8NF64 920 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 OR13J1Q8NGT2 312 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ATOH8Q96SQ7 321 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ACBD6Q9BR61 282 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 TUBB1Q9H4B7 451 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 NTN4Q9HB63 628 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 NECTIN3Q9NQS3 549 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 FBXO8Q9NRD0 319 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 TMEM39AQ9NV64 488 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 COMMD8Q9NX08 183 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 PDE10AQ9Y233 779 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 AP3M1Q9Y2T2 418 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 TMEM98Q9Y2Y6 226 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 SNX5Q9Y5X3 404 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ASPDHA6ND91 283 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ARNTLO00327 626 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 SLC22A3O75751 556 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 USP17L7P0C7H9 530 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 OGNP20774 298 aaKnown RBP15.75■□□□□ 0.11
SF3A2-201ENST00000221494 SHMT2P34897 504 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 GRK3P35626 688 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ETFBP38117 255 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 OR1G1P47890 313 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ZFP36L2P47974 494 aaKnown RBP15.75■□□□□ 0.11
SF3A2-201ENST00000221494 KCNC1P48547 511 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 POLR2JP52435 117 aaKnown RBP15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ERVK-8P63133 956 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 PLCL1Q15111 1095 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 CYP2A13Q16696 494 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 LRRC26Q2I0M4 334 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 C6orf141Q5SZD1 244 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 METTL23Q86XA0 190 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 KIAA2013Q8IYS2 634 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ABI1Q8IZP0 508 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 BPIFB6Q8NFQ5 453 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 CASP10Q92851 521 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 PCED1BQ96HM7 432 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ZNF419Q96HQ0 510 aaPredicted RBP15.75■□□□□ 0.11
SF3A2-201ENST00000221494 ZNF599Q96NL3 588 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 TMEM209Q96SK2 561 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 CSF3RQ99062 836 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 UGT2B28Q9BY64 529 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 SLC39A8Q9C0K1 460 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 C11orf49Q9H6J7 331 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 SPATA7Q9P0W8 599 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 RABL2BQ9UNT1 228 aa15.75■□□□□ 0.11
SF3A2-201ENST00000221494 MRPS14O60783 128 aaKnown RBP15.74■□□□□ 0.11
SF3A2-201ENST00000221494 BCAS1O75363 584 aaPredicted RBP15.74■□□□□ 0.11
SF3A2-201ENST00000221494 TPPPO94811 219 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 GABARAPO95166 117 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 MLYCDO95822 493 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 MT-CO1P00395 513 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 ANXA6P08133 673 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 CLTBP09497 229 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 CCDC159P0C7I6 412 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 TYMPP19971 482 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 ELK4P28324 431 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 OPRL1P41146 370 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 CHRNA4P43681 627 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 CLCQ05315 142 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 CHRNB3Q05901 458 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 RFX4Q33E94 735 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 FAM171BQ6P995 826 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 TXNDC11Q6PKC3 985 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 CRTC3Q6UUV7 619 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 ARHGAP36Q6ZRI8 547 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 SLC16A12Q6ZSM3 486 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 CYP2U1Q7Z449 544 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 R3HCC1LQ7Z5L2 792 aaKnown RBP15.74■□□□□ 0.11
SF3A2-201ENST00000221494 ZDHHC13Q8IUH4 622 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 RTL3Q8N8U3 475 aaKnown RBP15.74■□□□□ 0.11
SF3A2-201ENST00000221494 BHMTQ93088 406 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 RNF34Q969K3 372 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 KIAA1191Q96A73 305 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 FUNDC2Q9BWH2 189 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 SYTL2Q9HCH5 934 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 DNAJB9Q9UBS3 223 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 LRFN2Q9ULH4 789 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 PCDHB8Q9UN66 801 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 PRG3Q9Y2Y8 225 aaPredicted RBP15.74■□□□□ 0.11
SF3A2-201ENST00000221494 SNX10Q9Y5X0 201 aa15.74■□□□□ 0.11
SF3A2-201ENST00000221494 SYCE1LA8MT33 242 aa15.73■□□□□ 0.11
SF3A2-201ENST00000221494 RPS17P08708 135 aaKnown RBP15.73■□□□□ 0.11
SF3A2-201ENST00000221494 UROSP10746 265 aa15.73■□□□□ 0.11
SF3A2-201ENST00000221494 MTHFD2P13995 350 aa15.73■□□□□ 0.11
SF3A2-201ENST00000221494 ZNF37AP17032 561 aaPredicted RBP15.73■□□□□ 0.11
SF3A2-201ENST00000221494 IDUAP35475 653 aa15.73■□□□□ 0.11
SF3A2-201ENST00000221494 YAP1P46937 504 aaKnown RBP15.73■□□□□ 0.11
SF3A2-201ENST00000221494 RENBPP51606 427 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms