RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 NSMCE3Q96MG7 304 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 MRPL46Q9H2W6 279 aaKnown RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 EMCNQ9ULC0 261 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 PLA2G4CQ9UP65 541 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 RUVBL2Q9Y230 463 aaKnown RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 PCDHB1Q9Y5F3 818 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 PCDHGB2Q9Y5G2 931 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 MUC22E2RYF6 1773 aaPredicted RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 ZNF462Q96JM2 2506 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 C1orf232A0A0U1RR37 186 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 CCT8L1PA6NM43 557 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 H3BMM5 538 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 PHGDHO43175 533 aaKnown RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 TRIM13O60858 407 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 ZNF821O75541 412 aaPredicted RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 RALBP11234 206 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 ZNF30P17039 623 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 FDXRP22570 491 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 SERPINB5P36952 375 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 STK19P49842 368 aaPredicted RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 SUOXP51687 545 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 BNC1Q01954 994 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 CCDC15Q0P6D6 951 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 STARD3Q14849 445 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 PCLAFQ15004 111 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 ACAP2Q15057 778 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 GPR33Q49SQ1 333 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 ZRANB3Q5FWF4 1079 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 LRRC8EQ6NSJ5 796 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 C16orf46Q6P387 395 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 DBX2Q6ZNG2 339 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 TRPM8Q7Z2W7 1104 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 WDR75Q8IWA0 830 aaKnown RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 SCRN2Q96FV2 425 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 DCBLD2Q96PD2 775 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 AARSD1Q9BTE6 412 aaKnown RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 CIPCQ9C0C6 399 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 C12orf65Q9H3J6 166 aaKnown RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 STN1Q9H668 368 aaKnown RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 ZDHHC6Q9H6R6 413 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 ACTR5Q9H9F9 607 aaPredicted RBP12.11□□□□□ -0.47
SNU13-201ENST00000215956 SLCO1B3Q9NPD5 702 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 TAS2R13Q9NYV9 303 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 FKBPLQ9UIM3 349 aa12.11□□□□□ -0.47
SNU13-201ENST00000215956 ATMQ13315 3056 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 FAM149AA5PLN7 773 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 BUD23O43709 281 aaKnown RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 SNNO75324 88 aaPredicted RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 VPS26AO75436 327 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 C1QL1O75973 258 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 SRP72O76094 671 aaKnown RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 SLC4A1P02730 911 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 ESR1P03372 595 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 CISD3P0C7P0 127 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 ZNF7P17097 686 aaPredicted RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 XPAP23025 273 aaPredicted RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 SPAM1P38567 509 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 SKIV2L2P42285 1042 aaKnown RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 BST1Q10588 318 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 DPY19L3Q6ZPD9 716 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 LYSMD3Q7Z3D4 306 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 SNX20Q7Z614 316 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 SLC22A9Q8IVM8 553 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 RAVER1Q8IY67 606 aaKnown RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 OR6K2Q8NGY2 324 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 PIP4K2CQ8TBX8 421 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 KCTD4Q8WVF5 259 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 ULK4Q96C45 1275 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 MKRN2Q9H000 416 aaKnown RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 CDH19Q9H159 772 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 SUDS3Q9H7L9 328 aaPredicted RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 ITM2CQ9NQX7 267 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 PKD2L2Q9NZM6 624 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 MARCH4Q9P2E8 410 aaPredicted RBP12.1□□□□□ -0.47
SNU13-201ENST00000215956 DKK3Q9UBP4 350 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 BTBD3Q9Y2F9 522 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 STON1Q9Y6Q2 735 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 NAV2Q8IVL1 2488 aa12.1□□□□□ -0.47
SNU13-201ENST00000215956 MGAQ8IWI9 3026 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 UBA6A0AVT1 1052 aaPredicted RBP12.09□□□□□ -0.47
SNU13-201ENST00000215956 TSPAN11A1L157 253 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 OR51F1A6NGY5 319 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 METTL12A8MUP2 240 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 TK2O00142 265 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 AURKAO14965 403 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 BNIP3LO60238 219 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 CTPS1P17812 591 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 HNF1BP35680 557 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 TPMTP51580 245 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 ARFIP2P53365 341 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 ATP6V0D1P61421 351 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 NAA20P61599 178 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 IRF9Q00978 393 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 OCRLQ01968 901 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 ARHGEF7Q14155 803 aa12.09□□□□□ -0.47
SNU13-201ENST00000215956 GEN1Q17RS7 908 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms