RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Bpifa1P97361 278 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Lypla1P97823 230 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Ak8Q32M07 479 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Itm2aQ61500 263 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Stmnd1Q6P3A1 279 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Ubtd2Q6PGH0 234 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Tigd3Q7TM95 470 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Cdh7Q8BM92 785 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Pycr2Q922Q4 320 aaKnown RBP22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Pih1d1Q9CQJ2 290 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Wfdc11A2A5H7 82 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 NuggcD3YWJ0 796 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Olfr620E9PZ66 313 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Rgsl1H3BL40 1073 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Vmn2r46L7N282 809 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Lefty2P57785 368 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Fam107aQ78TU8 144 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Sel1l3Q80TS8 1137 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Adamts2Q8C9W3 1213 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Gatad2aQ8CHY6 629 aaKnown RBP22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Slc8a2Q8K596 921 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Tekt2Q922G7 430 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Spz1Q99MY0 378 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Slco6d1Q9D5W6 683 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Tex9Q9D845 387 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 2010005H15RikQ9D8D6 97 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 AcadsbQ9DBL1 432 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Pias4Q9JM05 507 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Cdkl2Q9QUK0 568 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Dbn1Q9QXS6 706 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Hao1Q9WU19 370 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Nfs1Q9Z1J3 459 aa22.4■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Vmn2r103E9PWW0 856 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 H2-M9O19442 342 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Smad6O35182 495 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 MaffO54791 156 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 KitP05532 979 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Apoa4P06728 395 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Fpr-rs6Q3SXG2 339 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Q3UY34 256 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Acbd5Q5XG73 508 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Sema4aQ62178 760 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Rps9Q6ZWN5 194 aaKnown RBP22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Tas2r109Q7M707 316 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Itln1bQ80ZA0 313 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Znf775Q8BI73 538 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Osbpl6Q8BXR9 959 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Galnt5Q8C102 930 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Zc3h3Q8CHP0 950 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Slc6a20aQ8VDB9 592 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Rnf31Q924T7 1066 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Tnfaip8l2Q9D8Y7 184 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Plscr3Q9JIZ9 296 aa22.39■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Auts2A0A087WPF7 1261 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Gm14401A2ARV7 303 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Slc2a3P32037 493 aaKnown RBP22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Traf2P39429 501 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Rsrp1Q3UC65 298 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Trappc6aQ78XR0 159 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Fmo9Q8C116 539 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Strip2Q8C9H6 844 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 SntnQ8C9X1 147 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Ints10Q8K2A7 710 aaKnown RBP22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Gpihbp1Q9D1N2 228 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 GmprQ9DCZ1 345 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Gprc5dQ9JIL6 344 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Olfr316A0A0N4SVP2 306 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Gbp4A4UUI3 631 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Gm10800D3Z496 220 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Raph1F2Z3U3 1266 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Nccrp1G3X9C2 266 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Gm10250G3X9L6 160 aaKnown RBP22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Hnf1bP27889 558 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Tac1P41539 130 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Kcnj9P48543 393 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 CartptP56388 129 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Ebf1Q07802 591 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Tgm3Q08189 693 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Prss57Q14B24 284 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Arid5aQ3U108 590 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Olfr318Q5NCD7 306 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Ppm1nQ8BGL1 404 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 TwnkQ8CIW5 685 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Pcdhb10Q91VE5 797 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Trim12aQ99PQ1 284 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Psmd9Q9CR00 222 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Ppil1Q9D0W5 166 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Glipr1l1Q9DAG6 236 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Rnft1Q9DCN7 395 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Atp5hQ9DCX2 161 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 PyglQ9ET01 850 aa22.38■■□□□ 1.17
Scn1b-201ENSMUST00000098548 PikfyveQ9Z1T6 2097 aa22.37■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Catsperg2C6KI89 1145 aa22.37■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Gm3526E9PZM0 191 aa22.37■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Cdr1E9Q0B4 517 aa22.37■■□□□ 1.17
Scn1b-201ENSMUST00000098548 1700024B05RikE9Q6D7 167 aa22.37■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Cyp2w1E9Q816 493 aa22.37■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Gm3159K7N760 267 aa22.37■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Klf6O08584 283 aa22.37■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Rtn2O70622 471 aa22.37■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms