RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Prom2Q3UUY6 835 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Afap1l2Q5DTU0 825 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Arcn1Q5XJY5 511 aaKnown RBP8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Znf512Q69Z99 562 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Znf821Q6PD05 413 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Smpd4Q6ZPR5 823 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Parp12Q8BZ20 711 aaKnown RBP8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Lca5lQ8C0X0 741 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Dmtf1Q8CE22 761 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Mterf3Q8R3J4 412 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Mtfr2Q8VED8 361 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 B4galt3Q91YY2 395 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Mthfd1Q922D8 935 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Kdm8Q9CXT6 414 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Hipk3Q9ERH7 1192 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Il22bQ9JJY8 179 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Cyhr1Q9QXA1 311 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Slfn2Q9Z0I6 378 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Gria3Q9Z2W9 888 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Nup205A0A0J9YUD5 2061 aaKnown RBP8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Smok4aA0JLX3 433 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Zfp735B1ARH2 734 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 TriqkB2B9E1 86 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Zfp558E9Q1J0 407 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Vmn1r76F8VQ63 324 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Gm3043K7N693 218 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 PhyhO35386 338 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Mtco1P00397 514 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Sbk3P0C5K0 361 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Cdh2P15116 906 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Pcsk2P21661 637 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Ppm1bP36993 390 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Sult1e1P49891 295 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 CidecP56198 239 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Smad4P97471 551 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 CtscP97821 462 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Pcgf5Q3UK78 256 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 CybbQ61093 570 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Fnip1Q68FD7 1165 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 SepsecsQ6P6M7 504 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Prrg3Q6PAQ9 231 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Sgo2Q7TSY8 1164 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 UnkQ8BL48 810 aaKnown RBP8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Gpr152Q8BXS7 511 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Nrn1lQ8C4W3 162 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 4932414N04RikQ8CEQ9 752 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Ints10Q8K2A7 710 aaKnown RBP8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Rnf8Q8VC56 488 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Eps8l3Q91WL0 600 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Slc13a3Q91Y63 600 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Nck1Q99M51 377 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Atp13a2Q9CTG6 1169 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Q9D1K7 174 aaKnown RBP8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Cnbd2Q9D5U8 673 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Tnfsf13Q9D777 241 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Q9D979 236 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Il23aQ9EQ14 196 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Il17rbQ9JIP3 499 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Calm4Q9JM83 148 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Trpc4Q9QUQ5 974 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Rfc2Q9WUK4 349 aaKnown RBP8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Mad2l1Q9Z1B5 205 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Pex11bQ9Z210 259 aa8.2□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Atad5Q4QY64 1826 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Man1b1A2AJ15 658 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 FgaE9PV24 789 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Znf683I7HJS4 458 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 BC024978J3QPC3 361 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 NmbrO54799 390 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Prom1O54990 867 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Mmp10O55123 476 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 H2-K1P01901 369 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Rrm2P11157 390 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Fgl2P12804 432 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Stfa3P35173 103 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Impdh1P50096 514 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Hcrtr1P58307 416 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 H2-M3Q31093 336 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Lrrc58Q3UGP9 366 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Foxred2Q3USW5 665 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Trim40Q3UWA4 246 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Pabpc2Q62029 628 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Lrrc8eQ66JT1 795 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Dclk2Q6PGN3 756 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Kmt5cQ6Q783 468 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Mtmr10Q7TPM9 771 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Gpr141Q7TQP0 305 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Olfr389Q7TRX7 312 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Ddhd2Q80Y98 699 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Amigo2Q80ZD9 519 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Tmem11Q8BK08 190 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Thap1Q8CHW1 210 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Impg1Q8R1W8 798 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Dok4Q99KE3 325 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Abcg3Q99P81 650 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 4921530L21RikQ9CQ47 274 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Ndufaf4Q9D1H6 173 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Zfp236S4R299 1847 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Cyp2w1E9Q816 493 aa8.19□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Spaca6E9Q8Q8 339 aa8.19□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms