RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Chrna6Q9R0W9 494 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 RlfA2A7F4 1918 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Ism1A2ATD1 454 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Olfr620E9PZ66 313 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Galnt1O08912 559 aaKnown RBP16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Emp3O35912 163 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Prickle1Q3U5C7 832 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Abcb7Q61102 752 aaKnown RBP16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 CcnhQ61458 323 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Ltbp3Q61810 1268 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 TCAIMQ66JZ4 499 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Adamts16Q69Z28 1222 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Zmpste24Q80W54 475 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Fem1cQ8CEF1 617 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Olig2Q9EQW6 323 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Epb41l4bQ9JMC8 527 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Spint1Q9R097 507 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Vwa8Q8CC88 1905 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Kat6aQ8BZ21 2003 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Phf11bB4XVQ1 276 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Mtnd4P03911 459 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Serpinb5P70124 375 aaKnown RBP16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Smpdl3aP70158 445 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Eif4ebp2P70445 120 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 ArvcfP98203 962 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Slc22a15Q504N2 544 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Mrm3Q5ND52 418 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Nfe2l1Q61985 741 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Trnau1apQ80VC6 287 aaKnown RBP16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Tmtc4Q8BG19 741 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Ebf4Q8K4J2 599 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Atg10Q8R1P4 215 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 TbccQ8VCN9 341 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 4933425L06RikQ9D3Z8 585 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 AcadsbQ9DBL1 432 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 NfkbizQ9EST8 728 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 B9d1Q9R1S0 204 aa16.25■□□□□ 0.19
Shh-201ENSMUST00000002708 Nsmce4aG3XA30 381 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 RfngO09009 332 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Prkag1O54950 330 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 PargO88622 969 aaKnown RBP16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Pdcd5P56812 126 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Inf2Q0GNC1 1273 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Cyp2j13Q3UNV4 503 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Nfe2l2Q60795 597 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Plekha6Q7TQG1 1173 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 TufmQ8BFR5 452 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Fam72aQ8BFZ8 149 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 4932414N04RikQ8CEQ9 752 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 AclyQ91V92 1091 aaKnown RBP16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Rnf167Q91XF4 347 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Gjd3Q91YD1 278 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Q9CR55 154 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Tmbim6Q9D2C7 237 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 GabrqQ9JLF1 638 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Maged1Q9QYH6 775 aaKnown RBP16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Fam131cA2ADB2 273 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Itih4A6X935 942 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 9230113P08RikD3YWX3 137 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 F3P20352 294 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Brsk1Q5RJI5 778 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Pex11gQ6P6M5 241 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 D3Ertd751eQ8BGN2 192 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 MtbpQ8BJS8 894 aaKnown RBP16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Olfr866Q8VFI7 312 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Cdhr5Q8VHF2 831 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 AdprmQ99KS6 340 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Ola1Q9CZ30 396 aaKnown RBP16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Kif26aQ52KG5 1881 aa16.24■□□□□ 0.19
Shh-201ENSMUST00000002708 Rpl9-ps6A0A140T8T4 192 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Vmn2r54K7N649 806 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Gm13128L7MU96 475 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Gfra2O08842 464 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Sdc4O35988 198 aaKnown RBP16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Apoa4P06728 395 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Rpl9P51410 192 aaKnown RBP16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Rps24P62849 133 aaKnown RBP16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Trim40Q3UWA4 246 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Mgat5bQ765H6 792 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Letm2Q7TNU7 480 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Olfr366Q7TRY4 309 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Krt75Q8BGZ7 551 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Tbc1d10bQ8BHL3 798 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Morc4Q8BMD7 928 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Parp12Q8BZ20 711 aaKnown RBP16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Abi1Q8CBW3 481 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Bpifa3Q9D9J8 232 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Ppp1r2Q9DCL8 206 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Trem1Q9JKE2 230 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Pik3cdO35904 1043 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 TpmtO55060 240 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 P01810 119 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Cdh1P09803 884 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Slc2a4P14142 509 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Acvr1P37172 509 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Flt3lgP49772 232 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Hrh1P70174 488 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Fam20cQ5MJS3 579 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Tnfaip2Q61333 691 aa16.23■□□□□ 0.19
Shh-201ENSMUST00000002708 Rbl1Q64701 1063 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms