RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 KMOO15229 486 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 FAM155BO75949 473 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 CNTFP26441 200 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 PRLHRP49683 370 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 BLKP51451 505 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 CTSCP53634 463 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 LIMK2P53671 638 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 PPARDQ03181 441 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 IFFO1Q0D2I5 559 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 CASP8Q14790 479 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 LPAL2Q16609 132 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 PYCR3Q53H96 274 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 CTSL3PQ5NE16 218 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 PTRHD1Q6GMV3 140 aaKnown RBP12.14□□□□□ -0.47
LINC00339-213ENST00000642137 FAM45BPQ6NSW5 357 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 ZNF549Q6P9A3 640 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 DOK6Q6PKX4 331 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 LRIG3Q6UXM1 1119 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 DET1Q7L5Y6 550 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 HDXQ7Z353 690 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 CROCCP2Q86T23 111 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 LRRTM4Q86VH4 590 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 PARGQ86W56 976 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 CLDN19Q8N6F1 224 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 FAM45AQ8TCE6 357 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 DCAKDQ8WVC6 231 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 OR1E3Q8WZA6 343 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 TSACCQ96A04 125 aaPredicted RBP12.14□□□□□ -0.47
LINC00339-213ENST00000642137 MRRFQ96E11 262 aaKnown RBP12.14□□□□□ -0.47
LINC00339-213ENST00000642137 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 PANX3Q96QZ0 392 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 CCM2Q9BSQ5 444 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 TSSK1BQ9BXA7 367 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 ARRDC1-AS1Q9H2J1 176 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 CYP4F12Q9HCS2 524 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 FGF22Q9HCT0 170 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 MRPL40Q9NQ50 206 aaKnown RBP12.14□□□□□ -0.47
LINC00339-213ENST00000642137 ZNHIT2Q9UHR6 403 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 MOSPD1Q9UJG1 213 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 SUFUQ9UMX1 484 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 SLC6A14Q9UN76 642 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 MTO1Q9Y2Z2 717 aaKnown RBP12.14□□□□□ -0.47
LINC00339-213ENST00000642137 SDK1Q7Z5N4 2213 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 IQANK1A0A1B0GTG1 560 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 RASGRF2O14827 1237 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 KPNA5O15131 536 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 POP7O75817 140 aaKnown RBP12.13□□□□□ -0.47
LINC00339-213ENST00000642137 KRT38O76015 456 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 RASGRP1O95267 797 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 FTH1P02794 183 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 CSF2P04141 144 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 RETP07949 1114 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 ITGA2BP08514 1039 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 F7P08709 466 aaPredicted RBP12.13□□□□□ -0.47
LINC00339-213ENST00000642137 CHRM3P20309 590 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 NBL1P41271 181 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 SKIV2L2P42285 1042 aaKnown RBP12.13□□□□□ -0.47
LINC00339-213ENST00000642137 CTSKP43235 329 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 HK3P52790 923 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 POU4F1Q01851 419 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 DNAJC3Q13217 504 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 ALG11Q2TAA5 492 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 HECTD2Q5U5R9 776 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 UGT3A1Q6NUS8 523 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 TAOK1Q7L7X3 1001 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 C11orf96Q7Z7L8 435 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 HID1Q8IV36 788 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 ZNF547Q8IVP9 402 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 OXR1Q8N573 874 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 OR2W6PQ8NHA6 318 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 ANKRD7Q92527 254 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 KCNJ9Q92806 393 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 ZIM3Q96PE6 472 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 GPR22Q99680 433 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 CARS2Q9HA77 564 aaKnown RBP12.13□□□□□ -0.47
LINC00339-213ENST00000642137 CAPN10Q9HC96 672 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 TRNAU1APQ9NX07 287 aaKnown RBP12.13□□□□□ -0.47
LINC00339-213ENST00000642137 KLHL42Q9P2K6 505 aa12.13□□□□□ -0.47
LINC00339-213ENST00000642137 PSMC3IPQ9P2W1 217 aaPredicted RBP12.13□□□□□ -0.47
LINC00339-213ENST00000642137 PNMA8BQ9ULN7 279 aaPredicted RBP12.13□□□□□ -0.47
LINC00339-213ENST00000642137 SMG5Q9UPR3 1016 aaKnown RBP12.13□□□□□ -0.47
LINC00339-213ENST00000642137 FAM95CA0A1B0GW59 222 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 TLDC2A0PJX2 215 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 MGAT4DA6NG13 374 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 DYNC1I1O14576 645 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 DFNA5O60443 496 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 CDH16O75309 829 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 VPS26AO75436 327 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 KRT37O76014 449 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 TRIM16O95361 564 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 SYPP08247 313 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 SNRPAP09012 282 aaKnown RBP12.12□□□□□ -0.47
LINC00339-213ENST00000642137 MPLP40238 635 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 ABCG1P45844 678 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 GNPDA1P46926 289 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 RXRGP48443 463 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 CLCNKAP51800 687 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 ARHGAP8P85298 464 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 BNC1Q01954 994 aa12.12□□□□□ -0.47
LINC00339-213ENST00000642137 KIF19Q2TAC6 998 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms