RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 N4BP2L2Q92802 583 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 LINGO1Q96FE5 620 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 DCUN1D1Q96GG9 259 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 BIRC8Q96P09 236 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 GPR78Q96P69 363 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 FAM129BQ96TA1 746 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 COPS8Q99627 209 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 RIOK2Q9BVS4 552 aaKnown RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 BOCQ9BWV1 1114 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 CXorf56Q9H5V9 222 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 FBRSL1Q9HCM7 1045 aaKnown RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 CYP4F12Q9HCS2 524 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 OXSMQ9NWU1 459 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 ZDHHC3Q9NYG2 299 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 GALPQ9UBC7 116 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 MARCOQ9UEW3 520 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 PPM1HQ9ULR3 514 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 L3MBTL1Q9Y468 752 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 NPEPPSL1A6NEC2 478 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 SUPT3HB4E1H0 165 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 H3BMM5 538 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 SOX1O00570 391 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 MBTPS2O43462 519 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 ITM2AO43736 263 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 ZBTB14O43829 449 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 KIF1CO43896 1103 aaKnown RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 DLX3O60479 287 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 DIAPH2O60879 1101 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 FKBP6O75344 327 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 SUPT3HO75486 399 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 CIB2O75838 187 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 SLC25A14O95258 325 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 ADRB3P13945 408 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 HNRNPLP14866 589 aaKnown RBP eCLIP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 CD1DP15813 335 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 ZNF37AP17032 561 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 GM2AP17900 193 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 MSH3P20585 1137 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 RPS3P23396 243 aaKnown RBP eCLIP8.75□□□□□ -1.013e-8■■■■■ 30.5
PHGDH-219ENST00000641513 ATP5F1P24539 256 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 CTHP32929 405 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 VHLP40337 213 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 SLC26A3P40879 764 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 SUOXP51687 545 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 AQP5P55064 265 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 IL2P60568 153 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 TIAL1Q01085 375 aaKnown RBP eCLIP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 BTKQ06187 659 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 CNTN1Q12860 1018 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 STARD3Q14849 445 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 COL19A1Q14993 1142 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 SETMARQ53H47 684 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 CES4AQ5XG92 561 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 LIPIQ6XZB0 460 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 ERN2Q76MJ5 926 aaKnown RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 DET1Q7L5Y6 550 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 RAB44Q7Z6P3 723 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 CPNE9Q8IYJ1 553 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 CLDN19Q8N6F1 224 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 JADE3Q92613 823 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 SCAMP4Q969E2 229 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 AP2M1Q96CW1 435 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 CCDC97Q96F63 343 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 NAF1Q96HR8 494 aaKnown RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 LRCH3Q96II8 777 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 UBXN10Q96LJ8 280 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 ZNF570Q96NI8 536 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 SLC30A3Q99726 388 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 GATA5Q9BWX5 397 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 P2RY12Q9H244 342 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 UBE2ZQ9H832 354 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 ACSS2Q9NR19 701 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 HEBP1Q9NRV9 189 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 ANGPTL2Q9UKU9 493 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 HCN2Q9UL51 889 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 RNF112Q9ULX5 631 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 DNAJC16Q9Y2G8 782 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 COQ6Q9Y2Z9 468 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 OAS3Q9Y6K5 1087 aaKnown RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 PRSS21Q9Y6M0 314 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 PIAS3Q9Y6X2 628 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 RANBP2P49792 3224 aaKnown RBP8.75□□□□□ -1.01
PHGDH-219ENST00000641513 NUMA1Q14980 2115 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 CUL9Q8IWT3 2517 aa8.75□□□□□ -1.01
PHGDH-219ENST00000641513 TRBV5-4A0A0C4DH59 114 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 RGSL1A5PLK6 1076 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 NEMP2A6NFY4 417 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 VGLL3A8MV65 326 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 CFAP99D6REC4 459 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 K7EQS6 105 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 UBXN8O00124 270 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 BTN3A1O00481 513 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 WNT9AO14904 365 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 NPC1O15118 1278 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 MID1O15344 667 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 MMP20O60882 483 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 PCDH8O95206 1070 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 WISP3O95389 354 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-219ENST00000641513 PSMG1O95456 288 aa8.74□□□□□ -1.01
PHGDH-219ENST00000641513 KLF8O95600 359 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms