RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TATDN1Q6P1N9 297 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 ADGRG2Q8IZP9 1017 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 C1orf127Q8N9H9 656 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 RAB2BQ8WUD1 216 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 SLC4A9Q96Q91 983 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 TSPAN18Q96SJ8 248 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.33■□□□□ 0.52
SCARB2-213ENST00000638680 PCDHAC1Q9H158 963 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 SLC7A8Q9UHI5 535 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 IQCF5A8MTL0 148 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 SSR2P43308 183 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 IRF9Q00978 393 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 CACNG1Q06432 222 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 PRKD1Q15139 912 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-213ENST00000638680 PLA2G4EQ3MJ16 856 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 UBE2J2Q8N2K1 259 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 GTPBP3Q969Y2 492 aaKnown RBP18.32■□□□□ 0.52
SCARB2-213ENST00000638680 IRF6O14896 467 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 TBX10O75333 385 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 MT-CYBP00156 380 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-213ENST00000638680 GOT2P00505 430 aaKnown RBP18.32■□□□□ 0.52
SCARB2-213ENST00000638680 SNHG28P0DPA3 235 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 CCR10P46092 362 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 TNFAIP8L3Q5GJ75 292 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 CPNE8Q86YQ8 564 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 GFM1Q96RP9 751 aaKnown RBP18.32■□□□□ 0.52
SCARB2-213ENST00000638680 C11orf16Q9NQ32 467 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 ASAH2Q9NR71 780 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 FETUBQ9UGM5 382 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 STOML2Q9UJZ1 356 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 CNTN6Q9UQ52 1028 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 TESMINQ9Y4I5 508 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 AMD1P17707 334 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 ASMTP46597 345 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 CDH12P55289 794 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 ZBTB6Q15916 424 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 DCST1Q5T197 706 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 C9orf64Q5T6V5 341 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 KLHDC10Q6PID8 442 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 TRPV3Q8NET8 790 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 XAGE5Q8WWM1 108 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 DMRTB1Q96MA1 342 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 DPEP3Q9H4B8 488 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 FAM105AQ9NUU6 356 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 AJAP1Q9UKB5 411 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-213ENST00000638680 NDST3O95803 873 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 IFNW1P05000 195 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 ELFN1P0C7U0 828 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 PTPN9P43378 593 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 TPTEP56180 551 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 C2orf80Q0P641 193 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 C2orf73Q8N5S3 287 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-213ENST00000638680 C1QTNF1Q9BXJ1 281 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 TRPV5Q9NQA5 729 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 GULP1Q9UBP9 304 aa18.32■□□□□ 0.52
SCARB2-213ENST00000638680 SMIM28A0A1B0GU29 152 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 C1QTNF3-AMACRE9PGA6 284 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 SLC9A3R1O14745 358 aaPredicted RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 TEX28O15482 410 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 POU2F1P14859 743 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 PAX3P23760 479 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 PLEKHG4Q58EX7 1191 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 SERPINA13PQ6UXR4 307 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF433Q8N7K0 673 aaPredicted RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 KAT8Q9H7Z6 458 aaKnown RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 APOBEC3GQ9HC16 384 aaKnown RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 GMIPQ9P107 970 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 CIDEBQ9UHD4 219 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 MANSC4A6NHS7 340 aaPredicted RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 C2CD4BA6NLJ0 364 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 ANXA4P09525 319 aaPredicted RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 RBBP4Q09028 425 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 KLF1Q13351 362 aaPredicted RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 TSTD2Q5T7W7 516 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 PIK3R3Q92569 461 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 PIGKQ92643 395 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF354BQ96LW1 612 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 EBPLQ9BY08 206 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 SNX10Q9Y5X0 201 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 PGLSO95336 258 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 MTPNP58546 118 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 CBX2Q14781 532 aaPredicted RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 SLC9A4Q6AI14 798 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 TP53INP1Q96A56 240 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 GPATCH1Q9BRR8 931 aaKnown RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 EIF2B4Q9UI10 523 aaKnown RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 TPD52L2O43399 206 aaKnown RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 TMEM63AO94886 807 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF132P52740 706 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 DCAF12L1Q5VU92 463 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 FAM92BQ6ZTR7 304 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 C17orf64Q86WR6 236 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 GPC2Q8N158 579 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 SIDT2Q8NBJ9 832 aaKnown RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 CSGALNACT1Q8TDX6 532 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 GPR20Q99678 358 aa18.31■□□□□ 0.52
SCARB2-213ENST00000638680 INTS10Q9NVR2 710 aaKnown RBP18.31■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF879B4DU55 563 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 MPZL2O60487 215 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 CLDN11O75508 207 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms