RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 CALML6Q8TD86 181 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 GRAMD1AQ96CP6 724 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 CXorf40BQ96DE9 158 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 SGF29Q96ES7 293 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 SNF8Q96H20 258 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 AHCYL2Q96HN2 611 aaKnown RBP8.1□□□□□ -1.11
PNKP-226ENST00000636840 SGSM3Q96HU1 749 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 TCF12Q99081 682 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 CCM2Q9BSQ5 444 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 KIFC1Q9BW19 673 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 RAB17Q9H0T7 212 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 WASH6PQ9NQA3 447 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 CATSPERZQ9NTU4 200 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 TMPRSS11EQ9UL52 423 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 SOX13Q9UN79 622 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 KCNK6Q9Y257 313 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 VPS9D1Q9Y2B5 631 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 DNAJC16Q9Y2G8 782 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 PLEKHM1Q9Y4G2 1056 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 MAD1L1Q9Y6D9 718 aa8.1□□□□□ -1.11
PNKP-226ENST00000636840 TP53BP1Q12888 1972 aaPredicted RBP8.1□□□□□ -1.11
PNKP-226ENST00000636840 ARHGEF17Q96PE2 2063 aaPredicted RBP8.09□□□□□ -1.11
PNKP-226ENST00000636840 FAM237BA0A1B0GVD1 139 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 TCRBV7S3A2A0A539 114 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 CCDC162PA2VCL2 907 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 CCL22O00626 93 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 TTI1O43156 1089 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 NOBOXO60393 691 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 TCEA3O75764 348 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 VAPBO95292 243 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 TTC4O95801 387 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 MT-CO3P00414 261 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 VIPP01282 170 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 FTH1P02794 183 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 F3P13726 295 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 ALDH4A1P30038 563 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 ARL4CP56559 192 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 HHEXQ03014 270 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 CAV1Q03135 178 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 ACVR1Q04771 509 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 SPIDRQ14159 915 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 KRT33BQ14525 404 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 HLTFQ14527 1009 aaKnown RBP eCLIP8.09□□□□□ -1.11
PNKP-226ENST00000636840 PLA2G4EQ3MJ16 856 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 BCL7AQ4VC05 210 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 RNASEH2BQ5TBB1 312 aaKnown RBP8.09□□□□□ -1.11
PNKP-226ENST00000636840 ANKRD22Q5VYY1 191 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 KCTD16Q68DU8 428 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 GUSBP11Q6P575 273 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 ABRAXAS1Q6UWZ7 409 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 DET1Q7L5Y6 550 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 TMPRSS7Q7RTY8 843 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 CAND1Q86VP6 1230 aaKnown RBP8.09□□□□□ -1.11
PNKP-226ENST00000636840 LRRC6Q86X45 466 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 LMNTD2Q8IXW0 634 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 CFAP206Q8IYR0 622 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 MPP5Q8N3R9 675 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 ARL14Q8N4G2 192 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 OR13J1Q8NGT2 312 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 OR2L2Q8NH16 312 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 GSDMBQ8TAX9 411 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 LRRC39Q96DD0 335 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 LINC00615Q96LM1 132 aaPredicted RBP8.09□□□□□ -1.11
PNKP-226ENST00000636840 SERPINB12Q96P63 405 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 DEPDC7Q96QD5 511 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 GFM1Q96RP9 751 aaKnown RBP8.09□□□□□ -1.11
PNKP-226ENST00000636840 SLC38A3Q99624 504 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 DPYSL5Q9BPU6 564 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 CCDC3Q9BQI4 270 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 ERP44Q9BS26 406 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 SCNM1Q9BWG6 230 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 TRIM31Q9BZY9 425 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 SYNDIG1Q9H7V2 258 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 SYBUQ9NX95 663 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 SLC2A6Q9UGQ3 507 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 CLCA2Q9UQC9 943 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 NEUROG3Q9Y4Z2 214 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 RPS6KL1Q9Y6S9 549 aa8.09□□□□□ -1.11
PNKP-226ENST00000636840 COL5A1P20908 1838 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 IGLV3-16A0A075B6K0 115 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 CTAGE15A4D2H0 777 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 H3BMM5 538 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 IFRD1O00458 451 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 KPNA5O15131 536 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 HYAL3O43820 417 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 AVILO75366 819 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 USP1O94782 785 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 DKK1O94907 266 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 CTAGE8P0CG41 777 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 MYF5P13349 255 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 AMD1P17707 334 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 XRCC1P18887 633 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 NDUFS1P28331 727 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 NMBRP28336 390 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 PBLDP30039 288 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 FOXN2P32314 431 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 ARSDP51689 593 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 ITGA8P53708 1063 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 CRADDP78560 199 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 SHC2P98077 582 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms