RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PRAMEF17Q5VTA0 474 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 FAM198BQ6UWH4 519 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 TRIM72Q6ZMU5 477 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 GRHL3Q8TE85 626 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 TM9SF4Q92544 642 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 EIF3CQ99613 913 aaKnown RBP17.77■□□□□ 0.44
CLN6-212ENST00000636020 STK33Q9BYT3 514 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 OR2AG1Q9H205 316 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 DHX35Q9H5Z1 703 aaKnown RBP17.77■□□□□ 0.44
CLN6-212ENST00000636020 ZBTB20Q9HC78 741 aaPredicted RBP17.77■□□□□ 0.44
CLN6-212ENST00000636020 ARFGAP3Q9NP61 516 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 RWDD2AQ9UIY3 292 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 CNTRLQ7Z7A1 2325 aa17.77■□□□□ 0.43
CLN6-212ENST00000636020 ANKHD1Q8IWZ3 2542 aaKnown RBP17.76■□□□□ 0.43
CLN6-212ENST00000636020 A0A1B0GTL3 188 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 GOLGA6L4A6NEF3 574 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 MTA2O94776 668 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 IPO13O94829 963 aaKnown RBP17.76■□□□□ 0.43
CLN6-212ENST00000636020 SPINT3P49223 89 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 MAN2A1Q16706 1144 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 INSCQ1MX18 579 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 ZNF648Q5T619 568 aaPredicted RBP17.76■□□□□ 0.43
CLN6-212ENST00000636020 WASH2PQ6VEQ5 465 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 SPOCD1Q6ZMY3 1216 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 RAB43Q86YS6 212 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 ZNF295-AS1Q8N0V1 137 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 GALNT16Q8N428 558 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 FAR1Q8WVX9 515 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 ITLN2Q8WWU7 325 aaPredicted RBP17.76■□□□□ 0.43
CLN6-212ENST00000636020 RELTQ969Z4 430 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 CXorf40BQ96DE9 158 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 MCEEQ96PE7 176 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 KCTD15Q96SI1 283 aaPredicted RBP17.76■□□□□ 0.43
CLN6-212ENST00000636020 PCDHB18PQ96TA0 734 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 NDST4Q9H3R1 872 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 FAM83DQ9H4H8 585 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 DNAJC16Q9Y2G8 782 aa17.76■□□□□ 0.43
CLN6-212ENST00000636020 TLCD2A6NGC4 264 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 CHUKO15111 745 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 CALB1P05937 261 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 COX6B1P14854 86 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 ZNF7P17097 686 aaPredicted RBP17.75■□□□□ 0.43
CLN6-212ENST00000636020 BPIP17213 487 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 RPL10P27635 214 aaKnown RBP17.75■□□□□ 0.43
CLN6-212ENST00000636020 TDRD12Q587J7 1177 aaKnown RBP17.75■□□□□ 0.43
CLN6-212ENST00000636020 AGAP9Q5VTM2 703 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 CRTC3Q6UUV7 619 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 MRGPREQ86SM8 312 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 PHF13Q86YI8 300 aaPredicted RBP17.75■□□□□ 0.43
CLN6-212ENST00000636020 BBS5Q8N3I7 341 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 CLEC1AQ8NC01 280 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 CPT1BQ92523 772 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 FER1L6-AS2Q96M78 137 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 CD180Q99467 661 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 TRIM39Q9HCM9 518 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 CHST11Q9NPF2 352 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 DNPEPQ9ULA0 475 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 CSAG2Q9Y5P2 127 aa17.75■□□□□ 0.43
CLN6-212ENST00000636020 ANKRD62A6NC57 917 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 GPR89AB7ZAQ6 455 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 MAFKO60675 156 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 GFPT2O94808 682 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 GPR89BP0CG08 455 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 HOXB4P17483 251 aaPredicted RBP17.74■□□□□ 0.43
CLN6-212ENST00000636020 FECHP22830 423 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 HTR1EP28566 365 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 OTX2P32243 289 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 NSFP46459 744 aaKnown RBP17.74■□□□□ 0.43
CLN6-212ENST00000636020 EPHB1P54762 984 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 OGDHQ02218 1023 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 NCF4Q15080 339 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 ZNF630Q2M218 657 aaPredicted RBP17.74■□□□□ 0.43
CLN6-212ENST00000636020 PLA2G4EQ3MJ16 856 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 VWA3BQ502W6 1294 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 DCAF10Q5QP82 559 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 PPP1R15BQ5SWA1 713 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 ERMARDQ5T6L9 678 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 BNC2Q6ZN30 1099 aaPredicted RBP17.74■□□□□ 0.43
CLN6-212ENST00000636020 ADGRG6Q86SQ4 1221 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 NXPE1Q8N323 547 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 IP6K3Q96PC2 410 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 TIMM29Q9BSF4 260 aa17.74■□□□□ 0.43
CLN6-212ENST00000636020 NOVA2Q9UNW9 492 aaKnown RBP17.74■□□□□ 0.43
CLN6-212ENST00000636020 UBA6A0AVT1 1052 aaPredicted RBP17.73■□□□□ 0.43
CLN6-212ENST00000636020 KMOO15229 486 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 IL4RP24394 825 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 MMP13P45452 471 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 SOX8P57073 446 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 DPYSQ14117 519 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 IHHQ14623 411 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 DNTTIP2Q5QJE6 756 aaKnown RBP17.73■□□□□ 0.43
CLN6-212ENST00000636020 DNAJC24Q6P3W2 148 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 KLHL35Q6PF15 583 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 SYTL1Q8IYJ3 562 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 CLIP3Q96DZ5 547 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 TRAPPC9Q96Q05 1148 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 LYSMD1Q96S90 227 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 WDR77Q9BQA1 342 aaPredicted RBP17.73■□□□□ 0.43
CLN6-212ENST00000636020 SNRNP25Q9BV90 132 aaKnown RBP17.73■□□□□ 0.43
CLN6-212ENST00000636020 PCMTD2Q9NV79 361 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms