RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	HDAC7	Q8WUI4	952 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	TMEM170A	Q8WVE7	144 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	SMARCE1	Q969G3	411 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	DYNLL2	Q96FJ2	89 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	ZNF479	Q96JC4	524 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	SLITRK1	Q96PX8	696 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	TEFM	Q96QE5	360 aa	Known RBP	2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	FCRL5	Q96RD9	977 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	ZPBP	Q9BS86	351 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	H2AFJ	Q9BTM1	129 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	IFT27	Q9BW83	186 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	HEMGN	Q9BXL5	484 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	TEX13B	Q9BXU2	312 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	CRNKL1	Q9BZJ0	848 aa	Known RBP	2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	FAM234A	Q9H0X4	552 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	SCPEP1	Q9HB40	452 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	SLC38A10	Q9HBR0	1119 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	SNTG1	Q9NSN8	517 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	HOXC10	Q9NYD6	342 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	GRHL1	Q9NZI5	618 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	KIAA1456	Q9P272	454 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	NLK	Q9UBE8	527 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	INTS6	Q9UL03	887 aa	Known RBP	2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	PCDHGB4	Q9UN71	923 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	A4GNT	Q9UNA3	340 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	TNFSF13B	Q9Y275	285 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	EXOC6B	Q9Y2D4	811 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	ADAM18	Q9Y3Q7	739 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	RIPK3	Q9Y572	518 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	CAPN7	Q9Y6W3	813 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	ELP1	O95163	1332 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	NBEA	Q8NFP9	2946 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	GVINP1	Q7Z2Y8	2422 aa		2.56	□□□□□ -2
SMARCB1-208	ENST00000634926	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	SYNDIG1L	A6NDD5	238 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	EPOP	A6NHQ4	379 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	LRRC53	A6NM62	1247 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926		A8MZ25	164 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	EIF3CL	B5ME19	914 aa	Known RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	IPO8	O15397	1037 aa	Known RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	PAGE4	O60829	102 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	USP12	O75317	370 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	ERAL1	O75616	437 aa	Known RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	SURF6	O75683	361 aa	Known RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	GJB3	O75712	270 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	FLOT1	O75955	427 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	BEST1	O76090	585 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	DNTT	P04053	509 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	ASGR1	P07306	291 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	ADRB2	P07550	413 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	IRF1	P10914	325 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	CSF2RA	P15509	400 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	IL11	P20809	199 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	POU1F1	P28069	291 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	TACR3	P29371	465 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	TTK	P33981	857 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	PPARG	P37231	505 aa	Predicted RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	NNMT	P40261	264 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	UBA7	P41226	1012 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	GARS	P41250	739 aa	Known RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	EFNA5	P52803	228 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	YWHAZ	P63104	245 aa	Known RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	IFI35	P80217	286 aa	Predicted RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	GOLGA8DP	Q0D2H9	430 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	NIPAL4	Q0D2K0	466 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	CSTF3	Q12996	717 aa	Known RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	STK4	Q13043	487 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	ITPR1	Q14643	2758 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	TAF11	Q15544	211 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	INPP5J	Q15735	1006 aa	Predicted RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	EDRF1	Q3B7T1	1238 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	DPCR1	Q3MIW9	517 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	AWAT1	Q58HT5	328 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	UMODL1	Q5DID0	1318 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	ARL13A	Q5H913	290 aa	Predicted RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	TMEM268	Q5VZI3	342 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	MROH7	Q68CQ1	1323 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	TXNDC8	Q6A555	127 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	PSRC1	Q6PGN9	363 aa	Predicted RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	COLCA1	Q6ZS62	124 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	CUZD1	Q86UP6	607 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	AACS	Q86V21	672 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	ERC1	Q8IUD2	1116 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	TAGAP	Q8N103	731 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	BCAS4	Q8TDM0	211 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	WIPF2	Q8TF74	440 aa	Predicted RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	PIGK	Q92643	395 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	KAT2B	Q92831	832 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	CALML4	Q96GE6	196 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	CMTM3	Q96MX0	182 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	SLF1	Q9BQI6	1058 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	FRMD8	Q9BZ67	464 aa	Predicted RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	FTO	Q9C0B1	505 aa	Known RBP eCLIP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	SMARCAD1	Q9H4L7	1026 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	SH2D4A	Q9H788	454 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	KAT14	Q9H8E8	782 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	FBRSL1	Q9HCM7	1045 aa	Known RBP	2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	IL1RAPL2	Q9NP60	686 aa		2.55	□□□□□ -2
SMARCB1-208	ENST00000634926	SPATS2L	Q9NUQ6	558 aa	Known RBP	2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms