RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TSPAN4O14817 238 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PRPSAP2O60256 369 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 SNAP29O95721 258 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 WDPCPO95876 746 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PRKCGP05129 697 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 RETP07949 1114 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CBLP22681 906 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 SHMT2P34897 504 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 RFC2P35250 354 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 SOX9P48436 509 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 BCAR1P56945 870 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 ERVK-21P61565 698 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 FADDQ13158 208 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 TFDP2Q14188 446 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 MXD4Q14582 209 aaPredicted RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PLCL1Q15111 1095 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 TAF12Q16514 161 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PPP1R3AQ16821 1122 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 GOLGA7BQ2TAP0 167 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 SPATS1Q496A3 300 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 ZBTB37Q5TC79 503 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 REP15Q6BDI9 236 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 C8orf82Q6P1X6 216 aaPredicted RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CYS1Q717R9 158 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 STRADAQ7RTN6 431 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 RASGRP3Q8IV61 690 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CDH26Q8IXH8 852 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 C2orf69Q8N8R5 385 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CHST13Q8NET6 341 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 OR4M1Q8NGD0 313 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 OR8K5Q8NH50 307 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 SLC7A14Q8TBB6 771 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 MCOLN3Q8TDD5 553 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 DEPDC1BQ8WUY9 529 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 NXPE3Q969Y0 559 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PDXPQ96GD0 296 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 SIGLEC10Q96LC7 697 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PGLYRP2Q96PD5 576 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CAMKK2Q96RR4 588 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 WACQ9BTA9 647 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 UCK2Q9BZX2 261 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 NXF2Q9GZY0 626 aaKnown RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PIH1D1Q9NWS0 290 aaKnown RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CACNA2D2Q9NY47 1150 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 OPTCQ9UBM4 332 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 FAM8A1Q9UBU6 413 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 RAPGEFL1Q9UHV5 662 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 TSPAN16Q9UKR8 245 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 TRIP11Q15643 1979 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 H0Y626 953 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 I3L521 148 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PPEF2O14830 753 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 B4GAT1O43505 415 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 HCRTO43612 131 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PPM1BO75688 479 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 HPRP00739 348 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 AMHP03971 560 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 MYL3P08590 195 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 F7P08709 466 aaPredicted RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 RBP1P09455 135 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CD1EP15812 388 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PCSK2P16519 638 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 NPR3P17342 541 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 ALOX12P18054 663 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 ACVR2AP27037 513 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 HMGCLP35914 325 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 GGT5P36269 586 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 GARSP41250 739 aaKnown RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 NKX3-2P78367 333 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CCNA1P78396 465 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CRADDP78560 199 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 DBPQ10586 325 aaPredicted RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 TRAF3Q13114 568 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 EFR3AQ14156 821 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 AMHR2Q16671 573 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 DPY19L1Q2PZI1 675 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 SLC10A6Q3KNW5 377 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 TTC23Q5W5X9 447 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 FCRLBQ6BAA4 426 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 DENND5AQ6IQ26 1287 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PRMT9Q6P2P2 845 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 LBX2Q6XYB7 198 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 UTS2BQ765I0 119 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 FBXO16Q8IX29 292 aaPredicted RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CMTR2Q8IYT2 770 aaKnown RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 TAGAPQ8N103 731 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CPA6Q8N4T0 437 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 TXNDC5Q8NBS9 432 aaKnown RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 TRPV3Q8NET8 790 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 OR4M2Q8NGB6 313 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 CLEC4CQ8WTT0 213 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 PPP1R13LQ8WUF5 828 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 FAR1Q8WVX9 515 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 RPL3LQ92901 407 aaKnown RBP7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 HDAC10Q969S8 669 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 ZNF566Q969W8 418 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 HPDLQ96IR7 371 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 ELMO2Q96JJ3 720 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 FAM167AQ96KS9 214 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 MUS81Q96NY9 551 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms