RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 LDHCP07864 332 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 KRT19P08727 400 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 MSH3P20585 1137 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 CHRNB4P30926 498 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 ELF1P32519 619 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 CASP2P42575 452 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 MLLT10P55197 1068 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 RPS3AP61247 264 aaKnown RBP4.06□□□□□ -1.76
BRCA1-229ENST00000621897 ZBED6P86452 979 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 ADIPOQQ15848 244 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 INTS11Q5TA45 600 aaKnown RBP4.06□□□□□ -1.76
BRCA1-229ENST00000621897 LONP2Q86WA8 852 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 EMC1Q8N766 993 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 FRMD1Q8N878 549 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 OR8K5Q8NH50 307 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 PSD2Q9BQI7 771 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 EGLN1Q9GZT9 426 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 RSPH9Q9H1X1 276 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-229ENST00000621897 BICC1Q9H694 974 aaKnown RBP4.06□□□□□ -1.76
BRCA1-229ENST00000621897 LIMA1Q9UHB6 759 aaKnown RBP4.06□□□□□ -1.76
BRCA1-229ENST00000621897 ACAD8Q9UKU7 415 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 KCNK7Q9Y2U2 307 aa4.06□□□□□ -1.76
BRCA1-229ENST00000621897 TMEM184BQ9Y519 407 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-229ENST00000621897 ANKRD66B4E2M5 251 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 HCRTR2O43614 444 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 NR3C1P04150 777 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 TFAP2AP05549 437 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 PRSS56P0CW18 603 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 HRH2P25021 359 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 HOXC8P31273 242 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 HSD17B4P51659 736 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 CD81P60033 236 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 PMP22Q01453 160 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 SPOCK1Q08629 439 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 MED22Q15528 200 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 TSPAN33Q86UF1 283 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 ARHGAP12Q8IWW6 846 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 RNF168Q8IYW5 571 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-229ENST00000621897 SLC5A8Q8N695 610 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 TMEM190Q8WZ59 177 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 RFFLQ8WZ73 363 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 GFI1Q99684 422 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 MOV10L1Q9BXT6 1211 aaKnown RBP4.05□□□□□ -1.76
BRCA1-229ENST00000621897 PDCL3Q9H2J4 239 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 EPB41L5Q9HCM4 733 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 TMEM98Q9Y2Y6 226 aa4.05□□□□□ -1.76
BRCA1-229ENST00000621897 BICDL2A1A5D9 508 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 ANTXRLA6NF34 631 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 MAP2K7O14733 419 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 BUD23O43709 281 aaKnown RBP4.04□□□□□ -1.76
BRCA1-229ENST00000621897 ZNF217O75362 1048 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 NDUFS3O75489 264 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 TBX6O95947 436 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-229ENST00000621897 LIPFP07098 398 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 ACADLP28330 430 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 GALCP54803 685 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 NIPAL4Q0D2K0 466 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 G3BP1Q13283 466 aaKnown RBP eCLIP4.04□□□□□ -1.76
BRCA1-229ENST00000621897 NAB2Q15742 525 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 CCDC70Q6NSX1 233 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 PACS1Q6VY07 963 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 ZNF497Q6ZNH5 498 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 CCDC190Q86UF4 302 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 GCSAMQ8N6F7 178 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 C1orf52Q8N6N3 182 aaKnown RBP4.04□□□□□ -1.76
BRCA1-229ENST00000621897 PCYOX1LQ8NBM8 494 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 HJURPQ8NCD3 748 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-229ENST00000621897 ZNF485Q8NCK3 441 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 ADAD2Q8NCV1 583 aaKnown RBP4.04□□□□□ -1.76
BRCA1-229ENST00000621897 ZNF248Q8NDW4 579 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 ZNF473Q8WTR7 871 aaKnown RBP4.04□□□□□ -1.76
BRCA1-229ENST00000621897 LRR1Q96L50 414 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 PRMT6Q96LA8 375 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-229ENST00000621897 PTTG2Q9NZH5 202 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 C2CD2Q9Y426 696 aa4.04□□□□□ -1.76
BRCA1-229ENST00000621897 DUXAA6NLW8 204 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 HHLA1C9JL84 531 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 SELLP14151 372 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 GNB3P16520 340 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 ANXA7P20073 488 aaKnown RBP4.03□□□□□ -1.76
BRCA1-229ENST00000621897 PIK3CAP42336 1068 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 NR2C2P49116 596 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 MMP15P51511 669 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 CTSCP53634 463 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 GOLGA8DPQ0D2H9 430 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 SIM2Q14190 667 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-229ENST00000621897 TMEM198Q66K66 360 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 GLDNQ6ZMI3 551 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-229ENST00000621897 CPLX4Q7Z7G2 160 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 RDM1Q8NG50 284 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 SGCDQ92629 289 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 SECISBP2LQ93073 1101 aaKnown RBP4.03□□□□□ -1.76
BRCA1-229ENST00000621897 C1orf74Q96LT6 269 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 TMEM39BQ9GZU3 492 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 ZBTB20Q9HC78 741 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-229ENST00000621897 RRP7BPQ9NSQ0 103 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 SLC38A7Q9NVC3 462 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 ADPRHL2Q9NX46 363 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 DNAJB4Q9UDY4 337 aa4.03□□□□□ -1.76
BRCA1-229ENST00000621897 PIAS3Q9Y6X2 628 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms