RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 SUV39H1O43463 412 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ZBTB7AO95365 584 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SLURP2P0DP57 97 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 MFSD14CQ5VZR4 134 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 FAM122CQ6P4D5 195 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SMG8Q8ND04 991 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 RNF157Q96PX1 679 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 IL12RB2Q99665 862 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PRR12Q9ULL5 1215 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 STON1Q9Y6Q2 735 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 JCADQ9P266 1359 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ERVV-2B6SEH9 535 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SCAMP3O14828 347 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 GOT1P17174 413 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 GMPSP49915 693 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 NDST1P52848 882 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 BOLA3Q53S33 107 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF772Q68DY9 489 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CIAPIN1Q6FI81 312 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 JPH1Q9HDC5 661 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 DRG1Q9Y295 367 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 DAGLAQ9Y4D2 1042 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 MAP4K5Q9Y4K4 846 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CDK12Q9NYV4 1490 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 LOC100130705A0A1B0GUX0 176 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CD53P19397 219 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ENPP6Q6UWR7 440 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF467Q7Z7K2 595 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CADM3Q8N126 398 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TTC29Q8NA56 475 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TESCQ96BS2 214 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ZFYVE1Q9HBF4 777 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SPATA6Q9NWH7 488 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 FZD1Q9UP38 647 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PDK2Q15119 407 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TIMM50Q3ZCQ8 353 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 FAM209AQ5JX71 171 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SMYD5Q6GMV2 418 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CA5BP1Q8WTZ4 195 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TRUB1Q8WWH5 349 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 MED30Q96HR3 178 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 BCL2L14Q9BZR8 327 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 OR10H1Q9Y4A9 318 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 AGPAT2O15120 278 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PRAMEF1O95521 474 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 GPC1P35052 558 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 HSD17B4P51659 736 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 FGL1Q08830 312 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF234Q14588 700 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 WASH2PQ6VEQ5 465 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 DGLUCYQ7Z3D6 616 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CYP4Z2PQ8N1L4 340 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SLC45A3Q96JT2 553 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF696Q9H7X3 374 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PRDM9Q9NQV7 894 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PRMT8Q9NR22 394 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 HES2Q9Y543 173 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SHROOM2Q13796 1616 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 NCR1O76036 304 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 MUTP22033 750 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TCF7P36402 384 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 OR3A3P47888 321 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 MRPS5P82675 430 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TKFCQ3LXA3 575 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 LYPD8Q6UX82 237 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 OR10H4Q8NGA5 316 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 OR5J2Q8NH18 312 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PER2O15055 1255 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 IRF1P10914 325 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PRKCEQ02156 737 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 LRRC66Q68CR7 880 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 KIF18BQ86Y91 864 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 HID1Q8IV36 788 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CMTR2Q8IYT2 770 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 BRINP2Q9C0B6 783 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SEC14L4Q9UDX3 406 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 UBQLN1Q9UMX0 589 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 C1orf196B1AJZ1 125 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PIGRP01833 764 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CLTBP09497 229 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 BMP4P12644 408 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 AGXTP21549 392 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 BRCC3P46736 316 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 DGKQP52824 942 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TWF1Q12792 350 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 BRINP3Q76B58 766 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SPAG16Q8N0X2 631 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CHCHD4Q8N4Q1 142 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TEX19Q8NA77 164 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 DENND6BQ8NEG7 585 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 AP2M1Q96CW1 435 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TMCO6Q96DC7 493 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 RDH12Q96NR8 316 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TAAR1Q96RJ0 339 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 RAD18Q9NS91 495 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 MYO5CQ9NQX4 1742 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 NEDD8-MDP1E9PL57 170 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 NFICP08651 508 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SERPINF2P08697 491 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms