RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 SF3B4Q15427 424 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL1A2-213ENST00000620463 FBXO48Q5FWF7 155 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 DESI1Q6ICB0 168 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 TFAP2DQ7Z6R9 452 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 FAM35AQ86V20 835 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 ZNF655Q8N720 491 aaPredicted RBP13.02□□□□□ -0.33
COL1A2-213ENST00000620463 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 TRPM4Q8TD43 1214 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 SNAPC3Q92966 411 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 PMEPA1Q969W9 287 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 MND1Q9BWT6 205 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 SLITRK2Q9H156 845 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 NXF3Q9H4D5 531 aaKnown RBP13.02□□□□□ -0.33
COL1A2-213ENST00000620463 FAM83DQ9H4H8 585 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 ZNHIT2Q9UHR6 403 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 LRFN2Q9ULH4 789 aa13.02□□□□□ -0.33
COL1A2-213ENST00000620463 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 ITGB1P05556 798 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 SUPT20HL2P0C7V6 817 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 FGF3P11487 239 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 EEFSECP57772 596 aaKnown RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 NFIAQ12857 509 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 RNF219Q5W0B1 726 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 SPERTQ8NA61 448 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 DEDD2Q8WXF8 326 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 NELL1Q92832 810 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 SH3YL1Q96HL8 342 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 PIGUQ9H490 435 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 DHRS7Q9Y394 339 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 MYOM1P52179 1685 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 A6NL46 340 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 KCNAB2Q13303 367 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 HEXDCQ8WVB3 486 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 AURKBQ96GD4 344 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 SLC45A3Q96JT2 553 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 ZFP42Q96MM3 310 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 TSSK3Q96PN8 268 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 ANKRD60Q9BZ19 345 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 CLCA3PQ9Y6N3 262 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 FAM25EA8MYX2 175 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 M0R233 179 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 BCAS1O75363 584 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 ICAM1P05362 532 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 PRKACGP22612 351 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 YWHAQP27348 245 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 SLC6A4P31645 630 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 CENPAP49450 140 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 GPR158Q5T848 1215 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 SLC26A9Q7LBE3 791 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 ALDH16A1Q8IZ83 802 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 OR5H6Q8NGV6 325 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 MFSD14AQ96MC6 490 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 SLC38A2Q96QD8 506 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 SLC29A1Q99808 456 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 XKR8Q9H6D3 395 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 KLHL28Q9NXS3 571 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 MAP3K20Q9NYL2 800 aaKnown RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 KLK14Q9P0G3 267 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 DCCP43146 1447 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 FAM159BA6NKW6 160 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 L7N2F9 121 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 DNAJB5O75953 348 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 ECDO95905 644 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 CYBBP04839 570 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 PNPLA4P41247 253 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 GRIA1P42261 906 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 ALDH9A1P49189 494 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 AP2S1P53680 142 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 NCS1P62166 190 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 CRELD1Q96HD1 420 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 ZFP3Q96NJ6 502 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 UCK2Q9BZX2 261 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 LHPPQ9H008 270 aa13.01□□□□□ -0.33
COL1A2-213ENST00000620463 PPIL3Q9H2H8 161 aaKnown RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 AKAP7Q9P0M2 348 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-213ENST00000620463 H0YAE9 185 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 KMOO15229 486 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 CYP3A4P08684 503 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 PRG2P13727 222 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 POU2F1P14859 743 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 MYF6P23409 242 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 IFNGR2P38484 337 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 MAP2K4P45985 399 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 LAPTM5Q13571 262 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 TXNRD3NBQ6F5E7 133 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 ZPBP2Q6X784 338 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 GALNT7Q86SF2 657 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 C2orf69Q8N8R5 385 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 ZDHHC15Q96MV8 337 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 NPLQ9BXD5 320 aaPredicted RBP13□□□□□ -0.33
COL1A2-213ENST00000620463 UBQLN2Q9UHD9 624 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 B3GNT3Q9Y2A9 372 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 INMT-MINDY4F8WBC2 141 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 RFPL1O75677 317 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 ERBB2P04626 1255 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 TAS2R39P59534 338 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 CDH18Q13634 790 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 LRP8Q14114 963 aa13□□□□□ -0.33
COL1A2-213ENST00000620463 CPSF6Q16630 551 aaKnown RBP eCLIP13□□□□□ -0.33
COL1A2-213ENST00000620463 PTPRNQ16849 979 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms