RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 MSLNLQ96KJ4 702 aa12.56□□□□□ -0.4
TNFAIP3-209ENST00000619035 COPS8Q99627 209 aa12.56□□□□□ -0.4
TNFAIP3-209ENST00000619035 TNFRSF12AQ9NP84 129 aa12.56□□□□□ -0.4
TNFAIP3-209ENST00000619035 LOC100653049A0A140TA62 436 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 SPECC1L-ADORA2AF8WAN1 911 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 GRID2O43424 1007 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 NPHS1O60500 1241 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 HNRNPCL1O60812 293 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 PEX11AO75192 247 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 MTX2O75431 263 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 KRT34O76011 436 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 SUPT7LO94864 414 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 TSPAN12O95859 305 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 IGFBP4P22692 258 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 AKT1P31749 480 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 WASP42768 502 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 MXRA7P84157 204 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 ELAVL3Q14576 367 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 PDCD2Q16342 344 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 ITPRIPL2Q3MIP1 535 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 FBXO48Q5FWF7 155 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 SH2D4BQ5SQS7 431 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 EGFLAMQ63HQ2 1017 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 FBXL19Q6PCT2 694 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 DET1Q7L5Y6 550 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 RHEBL1Q8TAI7 183 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 WDR60Q8WVS4 1066 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 MARK4Q96L34 752 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 ATOH8Q96SQ7 321 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 TMEM245Q9H330 911 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 FAM83DQ9H4H8 585 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 ZDHHC3Q9NYG2 299 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 EPS15L1Q9UBC2 864 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 MTCH2Q9Y6C9 303 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 CCDC189A1A4V9 331 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 KERAO60938 352 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 SIX3O95343 332 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 RPS3P23396 243 aaKnown RBP eCLIP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 MMP12P39900 470 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 SLC25A3Q00325 362 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 RALGDSQ12967 914 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 KPNB1Q14974 876 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 ACOX1Q15067 660 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 DPPA4Q7L190 304 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 RAB44Q7Z6P3 723 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 MMAAQ8IVH4 418 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 KCNV2Q8TDN2 545 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 ARRDC3Q96B67 414 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 CNDP1Q96KN2 507 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 FBRSL1Q9HCM7 1045 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 RAD18Q9NS91 495 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 UTP6Q9NYH9 597 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 DHRS7Q9Y394 339 aa12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 TCF20Q9UGU0 1960 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-209ENST00000619035 LRRC14BA6NHZ5 514 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 MATN2O00339 956 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 NPC1O15118 1278 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 APODP05090 189 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 MTHFD2P13995 350 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 AOC1P19801 751 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 IMPDH1P20839 514 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 PGM1P36871 562 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 LTBRP36941 435 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 GRIA2P42262 883 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 NSG1P42857 185 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 HERVK_113P63132 956 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 KHDC1Q4VXA5 237 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 ZNF678Q5SXM1 525 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 TMEM198Q66K66 360 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 SEL1L3Q68CR1 1132 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 FBXO39Q8N4B4 442 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 TMIEQ8NEW7 156 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 FUBP1Q96AE4 644 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 ULK4Q96C45 1275 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 TACO1Q9BSH4 297 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 THTPAQ9BU02 230 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 RIOK2Q9BVS4 552 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 ERVK-6Q9BXR3 956 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 STN1Q9H668 368 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 DYRK4Q9NR20 520 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 PPM1HQ9ULR3 514 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 TNRC18O15417 2968 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 MUC22E2RYF6 1773 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 RGSL1A5PLK6 1076 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 AGAP14A8MT82 685 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 ITGB7P26010 798 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 PSMD8P48556 350 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 CDH13P55290 713 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 SEC13P55735 322 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 B4GALNT1Q00973 533 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 LSM12Q3MHD2 195 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 GPRC6AQ5T6X5 926 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 FRMD7Q6ZUT3 714 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 CHPFQ8IZ52 775 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 SMRP1Q8NCR6 262 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 FAM161BQ96MY7 647 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 FAM129BQ96TA1 746 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 GSTO2Q9H4Y5 243 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 TCF7L2Q9NQB0 619 aa12.54□□□□□ -0.4
TNFAIP3-209ENST00000619035 HCN2Q9UL51 889 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms