RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 GPR34Q9UPC5 381 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 PRKAB1Q9Y478 270 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 ST14Q9Y5Y6 855 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 PSAT1Q9Y617 370 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 A0A1B0GTQ1 180 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 OR2AG2A6NM03 316 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 GRID2O43424 1007 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 DFNA5O60443 496 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 AHSGP02765 367 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 ZNF7P17097 686 aaPredicted RBP22.35■■□□□ 1.17
CBWD3-213ENST00000618217 STX2P32856 288 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 KBTBD12Q3ZCT8 623 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 BCL7AQ4VC05 210 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 EMBQ6PCB8 327 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 TMEM220Q6QAJ8 160 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 DET1Q7L5Y6 550 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 OXR1Q8N573 874 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 OR2I1PQ8NGU4 316 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 ZNF514Q96K75 400 aaPredicted RBP22.35■■□□□ 1.17
CBWD3-213ENST00000618217 MCMBPQ9BTE3 642 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 GAREM1Q9H706 876 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 FBXO6Q9NRD1 293 aaPredicted RBP22.35■■□□□ 1.17
CBWD3-213ENST00000618217 ZFATQ9P243 1243 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 ZNHIT2Q9UHR6 403 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 MOSPD1Q9UJG1 213 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 DNAH14Q0VDD8 3507 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 PRMT5O14744 637 aaPredicted RBP22.35■■□□□ 1.17
CBWD3-213ENST00000618217 RIPK2O43353 540 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 HAUS5O94927 633 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 AP2A2O94973 939 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 TNFP01375 233 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 RPS3P23396 243 aaKnown RBP eCLIP22.35■■□□□ 1.17
CBWD3-213ENST00000618217 GNPDA1P46926 289 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 BLKP51451 505 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 GTF2H3Q13889 308 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 LRRTM4Q86VH4 590 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 GALNT13Q8IUC8 556 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 GABPB2Q8TAK5 448 aaPredicted RBP22.35■■□□□ 1.17
CBWD3-213ENST00000618217 TMEM168Q9H0V1 697 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 ACSS3Q9H6R3 686 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 TM7SF3Q9NS93 570 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 TRNAU1APQ9NX07 287 aaKnown RBP22.35■■□□□ 1.17
CBWD3-213ENST00000618217 VPS9D1Q9Y2B5 631 aa22.35■■□□□ 1.17
CBWD3-213ENST00000618217 SCAMP1O15126 338 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 ABHD2P08910 425 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 PHBP35232 272 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 ARRB1P49407 418 aaPredicted RBP22.34■■□□□ 1.17
CBWD3-213ENST00000618217 PRLHRP49683 370 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 CNSTQ6PJW8 725 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 KANSL1Q7Z3B3 1105 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 SLC26A11Q86WA9 606 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 LRRC6Q86X45 466 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 CAVIN3Q969G5 261 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 OR2M4Q96R27 311 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 LRRC61Q9BV99 259 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 SLC13A1Q9BZW2 595 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 CLPBQ9H078 707 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 RXFP3Q9NSD7 469 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 GULP1Q9UBP9 304 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 SLC23A2Q9UGH3 650 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 APOBEC3BQ9UH17 382 aaKnown RBP22.34■■□□□ 1.17
CBWD3-213ENST00000618217 CRYL1Q9Y2S2 319 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 PLEKHM1Q9Y4G2 1056 aa22.34■■□□□ 1.17
CBWD3-213ENST00000618217 ARID1BQ8NFD5 2236 aaPredicted RBP22.33■■□□□ 1.17
CBWD3-213ENST00000618217 PFDN6O15212 129 aa22.33■■□□□ 1.17
CBWD3-213ENST00000618217 KMOO15229 486 aa22.33■■□□□ 1.17
CBWD3-213ENST00000618217 PIAS2O75928 621 aa22.33■■□□□ 1.17
CBWD3-213ENST00000618217 CER1O95813 267 aa22.33■■□□□ 1.17
CBWD3-213ENST00000618217 HNRNPKP61978 463 aaKnown RBP eCLIP22.33■■□□□ 1.17
CBWD3-213ENST00000618217 ZNF549Q6P9A3 640 aa22.33■■□□□ 1.17
CBWD3-213ENST00000618217 CRTC3Q6UUV7 619 aa22.33■■□□□ 1.17
CBWD3-213ENST00000618217 TRAPPC5Q8IUR0 188 aa22.33■■□□□ 1.17
CBWD3-213ENST00000618217 MINDY1Q8N5J2 469 aa22.33■■□□□ 1.17
CBWD3-213ENST00000618217 BEND7Q8N7W2 519 aaPredicted RBP22.33■■□□□ 1.17
CBWD3-213ENST00000618217 LINC00615Q96LM1 132 aaPredicted RBP22.33■■□□□ 1.17
CBWD3-213ENST00000618217 GTPBP2Q9BX10 602 aaKnown RBP22.33■■□□□ 1.17
CBWD3-213ENST00000618217 GPSM3Q9Y4H4 160 aa22.33■■□□□ 1.17
CBWD3-213ENST00000618217 FAM186AA6NE01 2351 aa22.33■■□□□ 1.16
CBWD3-213ENST00000618217 ARHGEF17Q96PE2 2063 aaPredicted RBP22.33■■□□□ 1.16
CBWD3-213ENST00000618217 PRR19A6NJB7 356 aa22.32■■□□□ 1.16
CBWD3-213ENST00000618217 CDX4O14627 284 aaPredicted RBP22.32■■□□□ 1.16
CBWD3-213ENST00000618217 BNIP3Q12983 259 aa22.32■■□□□ 1.16
CBWD3-213ENST00000618217 EFTUD2Q15029 972 aaKnown RBP eCLIP22.32■■□□□ 1.16
CBWD3-213ENST00000618217 UAP1Q16222 522 aaPredicted RBP22.32■■□□□ 1.16
CBWD3-213ENST00000618217 ZNF658BQ4V348 819 aaPredicted RBP22.32■■□□□ 1.16
CBWD3-213ENST00000618217 PRRT3Q5FWE3 981 aa22.32■■□□□ 1.16
CBWD3-213ENST00000618217 CTSL3PQ5NE16 218 aa22.32■■□□□ 1.16
CBWD3-213ENST00000618217 PRR23CQ6ZRP0 262 aa22.32■■□□□ 1.16
CBWD3-213ENST00000618217 NRROSQ86YC3 692 aa22.32■■□□□ 1.16
CBWD3-213ENST00000618217 CCL4L1Q8NHW4 92 aa22.32■■□□□ 1.16
CBWD3-213ENST00000618217 GPBAR1Q8TDU6 330 aa22.32■■□□□ 1.16
CBWD3-213ENST00000618217 CDKL2Q92772 493 aa22.32■■□□□ 1.16
CBWD3-213ENST00000618217 DNMT3AQ9Y6K1 912 aaPredicted RBP22.32■■□□□ 1.16
CBWD3-213ENST00000618217 UBA6A0AVT1 1052 aaPredicted RBP22.31■■□□□ 1.16
CBWD3-213ENST00000618217 POP7O75817 140 aaKnown RBP22.31■■□□□ 1.16
CBWD3-213ENST00000618217 ESR1P03372 595 aa22.31■■□□□ 1.16
CBWD3-213ENST00000618217 CELA2BP08218 269 aaPredicted RBP22.31■■□□□ 1.16
CBWD3-213ENST00000618217 DGKAP23743 735 aa22.31■■□□□ 1.16
CBWD3-213ENST00000618217 FMO4P31512 558 aa22.31■■□□□ 1.16
CBWD3-213ENST00000618217 EIF3BP55884 814 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms