RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ANKS6Q68DC2 871 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 ALG1LQ6GMV1 187 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 C16orf46Q6P387 395 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 ALKBH5Q6P6C2 394 aaKnown RBP8.49□□□□□ -1.05
GPC6-202ENST00000617456 LIPIQ6XZB0 460 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 NCCRP1Q6ZVX7 275 aaPredicted RBP8.49□□□□□ -1.05
GPC6-202ENST00000617456 DPPA4Q7L190 304 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 RELL1Q8IUW5 271 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 PELI3Q8N2H9 469 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 TEX26Q8N6G2 289 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 AGBL5Q8NDL9 886 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 ZFPM2Q8WW38 1151 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 PATE1Q8WXA2 126 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 KIAA1143Q96AT1 154 aaPredicted RBP8.49□□□□□ -1.05
GPC6-202ENST00000617456 SCRN2Q96FV2 425 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 ABHD17AQ96GS6 310 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 CSPG4P5Q96PW8 444 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 CTRCQ99895 268 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 MGME1Q9BQP7 344 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 REPIN1Q9BWE0 567 aaKnown RBP8.49□□□□□ -1.05
GPC6-202ENST00000617456 WDR26Q9H7D7 661 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 CBX8Q9HC52 389 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 TMEM9Q9P0T7 183 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 TAAR2Q9P1P5 351 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 ATXN10Q9UBB4 475 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 DNPEPQ9ULA0 475 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 PHTF1Q9UMS5 762 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 BOLA1Q9Y3E2 137 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 TEP1Q99973 2627 aaKnown RBP8.49□□□□□ -1.05
GPC6-202ENST00000617456 CACNA1DQ01668 2161 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 LOC101059948A0A1B0GTJ6 334 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 SSU72P8A0A1W2PR75 194 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 PRR19A6NJB7 356 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 A8MU76 341 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 DFFAO00273 331 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 MAP2K7O14733 419 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 RASSF9O75901 435 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 KRT7P08729 469 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 CCNB1P14635 433 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 IL1R2P27930 398 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 CSF2RBP32927 897 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 SCNN1BP51168 640 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 MLLT10P55197 1068 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 RPL26P61254 145 aaKnown RBP8.48□□□□□ -1.05
GPC6-202ENST00000617456 SLC25A11Q02978 314 aaKnown RBP8.48□□□□□ -1.05
GPC6-202ENST00000617456 DPTQ07507 201 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 IFFO1Q0D2I5 559 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 SLC10A7Q0GE19 358 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 ILF3Q12906 894 aaKnown RBP eCLIP8.48□□□□□ -1.05
GPC6-202ENST00000617456 RALGDSQ12967 914 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 TRA2AQ13595 282 aaKnown RBP eCLIP8.48□□□□□ -1.05
GPC6-202ENST00000617456 ZNF235Q14590 738 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 SPCS2Q15005 226 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 ACOX1Q15067 660 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 TUBB8Q3ZCM7 444 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 TDRD12Q587J7 1177 aaKnown RBP8.48□□□□□ -1.05
GPC6-202ENST00000617456 DCAF12Q5T6F0 453 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 THEMIS2Q5TEJ8 643 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 DENND2CQ68D51 928 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 TIGD7Q6NT04 549 aaPredicted RBP8.48□□□□□ -1.05
GPC6-202ENST00000617456 PNCKQ6P2M8 343 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 KDELC2Q7Z4H8 507 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 ZNF438Q7Z4V0 828 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 ATCAYQ86WG3 371 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 ZNF761Q86XN6 746 aaPredicted RBP8.48□□□□□ -1.05
GPC6-202ENST00000617456 NRROSQ86YC3 692 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 NLGN4XQ8N0W4 816 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 NPWQ8N729 165 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 NLGN4YQ8NFZ3 816 aaPredicted RBP8.48□□□□□ -1.05
GPC6-202ENST00000617456 OR4D9Q8NGE8 314 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 ANKRD49Q8WVL7 239 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 APOBEC4Q8WW27 367 aaKnown RBP8.48□□□□□ -1.05
GPC6-202ENST00000617456 MIB2Q96AX9 1013 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 ERP27Q96DN0 273 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 RNF31Q96EP0 1072 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 CELF6Q96J87 481 aaKnown RBP8.48□□□□□ -1.05
GPC6-202ENST00000617456 SLC45A3Q96JT2 553 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 TSGA13Q96PP4 275 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 MCCC1Q96RQ3 725 aaPredicted RBP8.48□□□□□ -1.05
GPC6-202ENST00000617456 ZNF670Q9BS34 389 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 DDA1Q9BW61 102 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 GSDMCQ9BYG8 508 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 KCNF1Q9H3M0 494 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.48□□□□□ -1.05
GPC6-202ENST00000617456 RPL26L1Q9UNX3 145 aaKnown RBP8.48□□□□□ -1.05
GPC6-202ENST00000617456 TP53TG5Q9Y2B4 290 aa8.48□□□□□ -1.05
GPC6-202ENST00000617456 TRBV23OR9-2A0A075B6M9 112 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 A0A087X0T9 212 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 SYCE3A1L190 88 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 RGSL1A5PLK6 1076 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 B4E171 279 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 MATN3O15232 486 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 PPM1DO15297 605 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 POLR3GO15318 223 aaPredicted RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 CAPN5O15484 640 aaPredicted RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 ATMINO43313 823 aaPredicted RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 GYPCP04921 128 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 H2AFZP0C0S5 128 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 FAM228BP0C875 321 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 THRAP10827 490 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms