RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ILF3Q12906 894 aaKnown RBP eCLIP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 GPS1Q13098 491 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 C14orf28Q4W4Y0 310 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 ZRANB3Q5FWF4 1079 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 PRAMEF17Q5VTA0 474 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 FAM69BQ5VUD6 431 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 OGFOD3Q6PK18 319 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 KLHDC8BQ8IXV7 354 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 DCBLD1Q8N8Z6 715 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 BRSK1Q8TDC3 778 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CPT1BQ92523 772 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 MAGOHBQ96A72 148 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 VAT1Q99536 393 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 TRIM31Q9BZY9 425 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 PLAC1Q9HBJ0 212 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 OCIAD1Q9NX40 245 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 FOXJ2Q9P0K8 574 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 PRR19A6NJB7 356 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 NTN3O00634 580 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 ANXA9O76027 345 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 GOT2P00505 430 aaKnown RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 LPOP22079 712 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 CES1P23141 567 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 TAF1AQ15573 450 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 CCNG2Q16589 344 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 SERPINA9Q86WD7 417 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 C17orf82Q86X59 251 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 GKN2Q86XP6 184 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 CCNJLQ8IV13 435 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 RASGEF1CQ8N431 466 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 SFRP1Q8N474 314 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 OXR1Q8N573 874 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 C2orf73Q8N5S3 287 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 AMER2Q8N7J2 671 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 EPB41L5Q9HCM4 733 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 PLAGL1Q9UM63 463 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 SNX12Q9UMY4 172 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 CCDC88CQ9P219 2028 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 MROH6A6NGR9 719 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 TNFRSF10CO14798 259 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 EPOP01588 193 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 IVLP07476 585 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 ZNF7P17097 686 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 WT1P19544 449 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 AKT1P31749 480 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 GMPRP36959 345 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 CLCNKAP51800 687 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 SH3BP2P78314 561 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 KCNAB1Q14722 419 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 DBN1Q16643 649 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 CCDC70Q6NSX1 233 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 IYDQ6PHW0 289 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 CCDC137Q6PK04 289 aaKnown RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 TAS2R42Q7RTR8 314 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 PROSER1Q86XN7 944 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 HOMEZQ8IX15 550 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 NRSN1Q8IZ57 195 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 SHISA5Q8N114 240 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 CCDC89Q8N998 374 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 ZSCAN5AQ9BUG6 496 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 XKR8Q9H6D3 395 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 AKIRIN1Q9H9L7 192 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 JRKLQ9Y4A0 524 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 NEUROG3Q9Y4Z2 214 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 CSNK1G3Q9Y6M4 447 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 FAM221BA6H8Z2 402 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 PDZK1P1A8MUH7 402 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 D6RAR5 112 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 TPP1O14773 563 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 MTSS1O43312 755 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 HCRTR1O43613 425 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 NRP2O60462 931 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 COILP38432 576 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 PPM1FP49593 454 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 BLKP51451 505 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 GABREP78334 506 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 HHEXQ03014 270 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 PRKG2Q13237 762 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 SEMA5AQ13591 1074 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 P3H1Q32P28 736 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 ITPRIPL1Q6GPH6 555 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 ZNF765Q7L2R6 523 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 ELMO2Q96JJ3 720 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 INSM2Q96T92 566 aaPredicted RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 DUSP23Q9BVJ7 150 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 CDH19Q9H159 772 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 LRRN3Q9H3W5 708 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 ARNT2Q9HBZ2 717 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 TRNAU1APQ9NX07 287 aaKnown RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 AAR2Q9Y312 384 aaKnown RBP5.6□□□□□ -1.51
CPNE3-208ENST00000614678 PKP3Q9Y446 797 aa5.6□□□□□ -1.51
CPNE3-208ENST00000614678 IGHV1OR21-1A0A087WYE8 117 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 A0A1W2PQ67 120 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 EFSO43281 561 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 KRT14P02533 472 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 HOXC4P09017 264 aaPredicted RBP5.59□□□□□ -1.51
CPNE3-208ENST00000614678 TPBGLP0DKB5 382 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 GLB1P16278 677 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 CA4P22748 312 aa5.59□□□□□ -1.51
CPNE3-208ENST00000614678 MSNP26038 577 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms