RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 NRTNQ99748 197 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 FRMD8P1Q9BZ68 369 aaPredicted RBP12.46□□□□□ -0.41
CSTF1-208ENST00000613138 NRSN2Q9GZP1 204 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 CASS4Q9NQ75 786 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 NLE1Q9NVX2 485 aaPredicted RBP12.46□□□□□ -0.41
CSTF1-208ENST00000613138 CRLS1Q9UJA2 301 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 DRG1Q9Y295 367 aaKnown RBP12.46□□□□□ -0.41
CSTF1-208ENST00000613138 CFAP20Q9Y6A4 193 aaKnown RBP12.46□□□□□ -0.41
CSTF1-208ENST00000613138 PRSS21Q9Y6M0 314 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 SDK2Q58EX2 2172 aa12.46□□□□□ -0.42
CSTF1-208ENST00000613138 CCDC162PA2VCL2 907 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 MROH6A6NGR9 719 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 PDZK1P1A8MUH7 402 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 E7EVH7 732 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 SNRNP200O75643 2136 aaKnown RBP12.45□□□□□ -0.42
CSTF1-208ENST00000613138 TCEA3O75764 348 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 SUN1O94901 812 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 F7P08709 466 aaPredicted RBP12.45□□□□□ -0.42
CSTF1-208ENST00000613138 F3P13726 295 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 ITIH1P19827 911 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 MSH3P20585 1137 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 ITPKBP27987 946 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 ACTN2P35609 894 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 INHBCP55103 352 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 SESN2P58004 480 aaPredicted RBP12.45□□□□□ -0.42
CSTF1-208ENST00000613138 UBE2IP63279 158 aaKnown RBP12.45□□□□□ -0.42
CSTF1-208ENST00000613138 HHEXQ03014 270 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 BIRC2Q13490 618 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 ITGA9Q13797 1035 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 GTF2H3Q13889 308 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 SEMA3AQ14563 771 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 NR1D2Q14995 579 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 C16orf72Q14CZ0 275 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 DBN1Q16643 649 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 MAP9Q49MG5 647 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 LDLRAP1Q5SW96 308 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 PHF19Q5T6S3 580 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 DRICH1Q6PGQ1 229 aaPredicted RBP12.45□□□□□ -0.42
CSTF1-208ENST00000613138 CES3Q6UWW8 571 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 NAPRTQ6XQN6 538 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 SERPINA9Q86WD7 417 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 SPNS2Q8IVW8 549 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 NXPE1Q8N323 547 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 OR6C4Q8NGE1 309 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 OR13J1Q8NGT2 312 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 GPR150Q8NGU9 434 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 WDR48Q8TAF3 677 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 HNRNPLLQ8WVV9 542 aaKnown RBP12.45□□□□□ -0.42
CSTF1-208ENST00000613138 PMEPA1Q969W9 287 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 GRAMD1AQ96CP6 724 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 CDKN2AIPNLQ96HQ2 116 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 TRIM56Q9BRZ2 755 aaKnown RBP12.45□□□□□ -0.42
CSTF1-208ENST00000613138 TIMM29Q9BSF4 260 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 ASCL3Q9NQ33 180 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 SMOXQ9NWM0 555 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 KCNK4Q9NYG8 393 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 PAK5Q9P286 719 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 SLC30A1Q9Y6M5 507 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 ITPR1Q14643 2758 aa12.45□□□□□ -0.42
CSTF1-208ENST00000613138 SPTBP11277 2137 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 IGHV5-10-1A0A0J9YXX1 117 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 AGAP14A8MT82 685 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 PSMD3O43242 534 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 ZSCAN12O43309 604 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 PPFIA2O75334 1257 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 AVILO75366 819 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 PNLIPP16233 465 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 FOXN2P32314 431 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 EIF2S3P41091 472 aaKnown RBP12.44□□□□□ -0.42
CSTF1-208ENST00000613138 FASLGP48023 281 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 PPM1FP49593 454 aaPredicted RBP12.44□□□□□ -0.42
CSTF1-208ENST00000613138 ZFP36L1Q07352 338 aaKnown RBP12.44□□□□□ -0.42
CSTF1-208ENST00000613138 CCDC173Q0VFZ6 552 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 CDH17Q12864 832 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 SNAP47Q5SQN1 464 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 ZDHHC20Q5W0Z9 365 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 TAS2R42Q7RTR8 314 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 SNX20Q7Z614 316 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 LDB1Q86U70 411 aaPredicted RBP12.44□□□□□ -0.42
CSTF1-208ENST00000613138 MPP5Q8N3R9 675 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 CLDN19Q8N6F1 224 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
CSTF1-208ENST00000613138 DTX3LQ8TDB6 740 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 HDAC10Q969S8 669 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 MAGOHBQ96A72 148 aaKnown RBP12.44□□□□□ -0.42
CSTF1-208ENST00000613138 PBKQ96KB5 322 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 CCDC74BQ96LY2 380 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 TTC25Q96NG3 672 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 PPP1R2P1Q96PQ5 205 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 SLC38A3Q99624 504 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 POLR1BQ9H9Y6 1135 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 OGFRQ9NZT2 677 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 CPNE7Q9UBL6 633 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 DKK4Q9UBT3 224 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 KLHL3Q9UH77 587 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 SNX12Q9UMY4 172 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 CHD6Q8TD26 2715 aa12.44□□□□□ -0.42
CSTF1-208ENST00000613138 CCDC187A0A096LP49 1063 aa12.43□□□□□ -0.42
CSTF1-208ENST00000613138 TRBV5-4A0A0C4DH59 114 aa12.43□□□□□ -0.42
CSTF1-208ENST00000613138 A8MU76 341 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms