RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 TRIM39Q9HCM9 518 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 RUVBL2Q9Y230 463 aaKnown RBP17.32■□□□□ 0.36
SREK1-216ENST00000612404 TMEM98Q9Y2Y6 226 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 PLLPQ9Y342 182 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 ZDBF2Q9HCK1 2354 aa17.31■□□□□ 0.36
SREK1-216ENST00000612404 TM9SF1O15321 606 aa17.31■□□□□ 0.36
SREK1-216ENST00000612404 ZNF37AP17032 561 aaPredicted RBP17.31■□□□□ 0.36
SREK1-216ENST00000612404 CLCN7P51798 805 aa17.31■□□□□ 0.36
SREK1-216ENST00000612404 N4BP2L1Q5TBK1 243 aaPredicted RBP17.31■□□□□ 0.36
SREK1-216ENST00000612404 KIAA0895LQ68EN5 471 aa17.31■□□□□ 0.36
SREK1-216ENST00000612404 C16orf46Q6P387 395 aa17.31■□□□□ 0.36
SREK1-216ENST00000612404 ADGRG6Q86SQ4 1221 aa17.31■□□□□ 0.36
SREK1-216ENST00000612404 BEND7Q8N7W2 519 aaPredicted RBP17.31■□□□□ 0.36
SREK1-216ENST00000612404 CD200R1Q8TD46 325 aa17.31■□□□□ 0.36
SREK1-216ENST00000612404 ANKRD49Q8WVL7 239 aa17.31■□□□□ 0.36
SREK1-216ENST00000612404 NXNL1Q96CM4 212 aa17.31■□□□□ 0.36
SREK1-216ENST00000612404 PANX3Q96QZ0 392 aa17.31■□□□□ 0.36
SREK1-216ENST00000612404 INTS9Q9NV88 658 aaKnown RBP17.31■□□□□ 0.36
SREK1-216ENST00000612404 CACNA1IQ9P0X4 2223 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 TMEM221A6NGB7 291 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 K7ESF4 209 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 M0R296 226 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 NDUFS2O75306 463 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 AP2A2O94973 939 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 GSTA1P08263 222 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 COL6A2P12110 1019 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 GLRBP48167 497 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 SLC18A1P54219 525 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 CLDN2P57739 230 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 IRX4P78413 519 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 GTF2H3Q13889 308 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 INSCQ1MX18 579 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 OTOAQ7RTW8 1153 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 CCDC91Q7Z6B0 441 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 TAX1BP1Q86VP1 789 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 CCDC63Q8NA47 563 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 GIMAP7Q8NHV1 300 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 COX14Q96I36 57 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 C1QTNF1Q9BXJ1 281 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 TEX101Q9BY14 249 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 SYTL2Q9HCH5 934 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 PHPT1Q9NRX4 125 aaPredicted RBP17.3■□□□□ 0.36
SREK1-216ENST00000612404 SPATS2LQ9NUQ6 558 aaKnown RBP17.3■□□□□ 0.36
SREK1-216ENST00000612404 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.3■□□□□ 0.36
SREK1-216ENST00000612404 ATXN10Q9UBB4 475 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 AXIN1O15169 862 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 LATO43561 262 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 KLHL2O95198 593 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 IGHV4-34P06331 123 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 CD9P21926 228 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 HNRNPA2B1P22626 353 aaKnown RBP17.3■□□□□ 0.36
SREK1-216ENST00000612404 TRIM23P36406 574 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 CTSCP53634 463 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 DLG1Q12959 904 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 FAM83EQ2M2I3 478 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 HHATQ5VTY9 493 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 LVRNQ6Q4G3 990 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 TMEM220Q6QAJ8 160 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 NAPRTQ6XQN6 538 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 SNX19Q92543 992 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 FUBP1Q96AE4 644 aaKnown RBP17.3■□□□□ 0.36
SREK1-216ENST00000612404 SCYL1Q96KG9 808 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 TSSK1BQ9BXA7 367 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 TMEM216Q9P0N5 145 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 CA5BQ9Y2D0 317 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 DHRS7Q9Y394 339 aa17.3■□□□□ 0.36
SREK1-216ENST00000612404 F8W8V4 182 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 FPGTO14772 594 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 SGTAO43765 313 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 MAGEC1O60732 1142 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 LTA4HP09960 611 aaKnown RBP17.29■□□□□ 0.36
SREK1-216ENST00000612404 TEAD1P28347 426 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 AKT2P31751 481 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 CCR5P51681 352 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 AGAP9Q5VTM2 703 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 TTC19Q6DKK2 380 aaPredicted RBP17.29■□□□□ 0.36
SREK1-216ENST00000612404 TRAPPC5Q8IUR0 188 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 CPNE9Q8IYJ1 553 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 ZBTB2Q8N680 514 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 DENND6BQ8NEG7 585 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 ARMC2Q8NEN0 867 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 DENND1AQ8TEH3 1009 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 DYDC1Q8WWB3 177 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 INPP5DQ92835 1189 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 BIRC7Q96CA5 298 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 SPACA7Q96KW9 195 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 UBXN10Q96LJ8 280 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 EBF2Q9HAK2 575 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 IGSF5Q9NSI5 407 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 FAM8A1Q9UBU6 413 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 POM121BA6NF01 834 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 QSOX1O00391 747 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 VEGFDO43915 354 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 WISP3O95389 354 aaPredicted RBP17.29■□□□□ 0.36
SREK1-216ENST00000612404 FTH1P02794 183 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 ZNF8P17098 575 aaPredicted RBP17.29■□□□□ 0.36
SREK1-216ENST00000612404 IL2P60568 153 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 GUCY1A3Q02108 690 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 TSNAXIP1Q2TAA8 658 aa17.29■□□□□ 0.36
SREK1-216ENST00000612404 KLC3Q6P597 504 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms