RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	EMILIN2	Q9BXX0	1053 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	R3HDML	Q9H3Y0	253 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	PDE10A	Q9Y233	779 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	KLHL20	Q9Y2M5	609 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	TESMIN	Q9Y4I5	508 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	PRR23D1	E9PI22	279 aa	Predicted RBP	13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	SDHD	O14521	159 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	KPNA6	O60684	536 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	ERAL1	O75616	437 aa	Known RBP	13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	IFNA14	P01570	189 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	ALPI	P09923	528 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	CKB	P12277	381 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	STT3A	P46977	705 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	HERVK_113	P63132	956 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	VARS2	Q5ST30	1063 aa	Known RBP	13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	RBFA	Q8N0V3	343 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	ZFP28	Q8NHY6	868 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	RNFT2	Q96EX2	444 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	ERVK-6	Q9BXR3	956 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	CCSER2	Q9H7U1	834 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	SMURF2	Q9HAU4	748 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571	IRS2	Q9Y4H2	1338 aa		13.71	□□□□□ -0.22
MUC1-223	ENST00000611571		A0A0G2JLL6	359 aa	Predicted RBP	13.7	□□□□□ -0.22
MUC1-223	ENST00000611571		H0Y858	1186 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	CBFA2T3	O75081	653 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	PRKD3	O94806	890 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	PGLS	O95336	258 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	GPI	P06744	558 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	UROS	P10746	265 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	IL4R	P24394	825 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	FEN1	P39748	380 aa	Known RBP	13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	EPS8	Q12929	822 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	GTF2H2	Q13888	395 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	ZNF789	Q5FWF6	425 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	CEP78	Q5JTW2	689 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	GTF2H2C	Q6P1K8	395 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	PROX1	Q92786	737 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	TMIGD2	Q96BF3	282 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	C12orf43	Q96C57	262 aa	Known RBP	13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	AURKB	Q96GD4	344 aa	Predicted RBP	13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	SLC45A3	Q96JT2	553 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	CORO1B	Q9BR76	489 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	AARSD1	Q9BTE6	412 aa	Known RBP	13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	HS3ST4	Q9Y661	456 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571		A0A0U1RQS6	177 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	ARSA	P15289	507 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	CTSK	P43235	329 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	MXD1	Q05195	221 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	NAE1	Q13564	534 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	ALF	Q53S48	1182 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	TRNP1	Q6NT89	227 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	EPHX4	Q8IUS5	362 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	FAR1	Q8WVX9	515 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	MYOC	Q99972	504 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	CTPS2	Q9NRF8	586 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	MYL12B	O14950	172 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	OR10H3	O60404	316 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	CENPA	P49450	140 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	GK3P	Q14409	553 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	PAFAH1B3	Q15102	231 aa	Known RBP	13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	SETMAR	Q53H47	684 aa	Predicted RBP	13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	SMYD5	Q6GMV2	418 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	USP45	Q70EL2	814 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	SPATA19	Q7Z5L4	167 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	SERPINA9	Q86WD7	417 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	PROSER1	Q86XN7	944 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	UXS1	Q8NBZ7	420 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	NTAN1	Q96AB6	310 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	ATP13A3	Q9H7F0	1226 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	ABCB9	Q9NP78	766 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	GTF2IRD1	Q9UHL9	959 aa		13.7	□□□□□ -0.22
MUC1-223	ENST00000611571	COL1A2	P08123	1366 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571		H3BNX3	289 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	SUV39H1	O43463	412 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	HTRA2	O43464	458 aa	Predicted RBP	13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	SERPINA1	P01009	418 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	MLLT6	P55198	1093 aa	Predicted RBP	13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	SULT2A1	Q06520	285 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	ANGPT1	Q15389	498 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	CCNYL2	Q5T2Q4	361 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	C10orf53	Q8N6V4	93 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	EEF1AKMT1	Q8WVE0	214 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	GTF2A1L	Q9UNN4	478 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	COQ6	Q9Y2Z9	468 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	SQOR	Q9Y6N5	450 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571		A6NHS1	94 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	INSIG1	O15503	277 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	SNAP29	O95721	258 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	TRBC1	P01850	177 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	USP50	Q70EL3	339 aa	Predicted RBP	13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	CLIP4	Q8N3C7	705 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	PTCD2	Q8WV60	388 aa	Known RBP	13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	TMBIM1	Q969X1	311 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	ROPN1L	Q96C74	230 aa		13.69	□□□□□ -0.22
MUC1-223	ENST00000611571	ITCH	Q96J02	903 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms