RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 J3QR06 171 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC16A5O15375 505 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 PLOD3O60568 738 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 ZBTB11O95625 1053 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 TPOP07202 933 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 MYOD1P15172 320 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 KCNA5P22460 613 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 TNFRSF8P28908 595 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 ARSEP51690 589 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 COG7P83436 770 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 HYAL1Q12794 435 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 BAATQ14032 418 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 TMEM35AQ53FP2 167 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 INTS8Q75QN2 995 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 ATG9AQ7Z3C6 839 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 HAUS6Q7Z4H7 955 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 GALNT13Q8IUC8 556 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 C1orf87Q8N0U7 546 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC5A8Q8N695 610 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 POMGNT2Q8NAT1 580 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC20A1Q8WUM9 679 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC38A5Q8WUX1 472 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 NUDCD2Q8WVJ2 157 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 FIG4Q92562 907 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 TMCO6Q96DC7 493 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 BICD1Q96G01 975 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 CDRT15Q96T59 188 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 SPATC1LQ9H0A9 340 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 CHMP1AQ9HD42 196 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 TMEM30AQ9NV96 361 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 TAS2R14Q9NYV8 317 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 AMACRQ9UHK6 382 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 PROCRQ9UNN8 238 aa4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 CKAP5Q14008 2032 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 LOC102723996A0A087X1L8 192 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 GPR75-ASB3A0A0A6YYF3 556 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 A0A1W2PP11 408 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 hCG_1809904A0A1W2PP81 198 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 A0A1W2PPE2 198 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 A0A1W2PR64 198 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 MAGEA13PA6NCF6 341 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 LILRA5A6NI73 299 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 C4orf47A7E2U8 309 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 HNRNPCL2B2RXH8 293 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 ZNF587BE7ETH6 402 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 TMEM189-UBE2V1I3L0A0 370 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 CLGNO14967 610 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 KRT86O43790 486 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 CAMTA2O94983 1202 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 CSPG5O95196 566 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 ZWINTO95229 277 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 DNTTP04053 509 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 VPREB1P12018 145 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 PLA2G2AP14555 144 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 POLR2CP19387 275 aaPredicted RBP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 MT3P25713 68 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 NMBRP28336 390 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 USP8P40818 1118 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 MATR3P43243 847 aaKnown RBP eCLIP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 LIG4P49917 911 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 ART1P52961 327 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 CTSCP53634 463 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 CD81P60033 236 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 ISL1P61371 349 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 RELQ04864 619 aaPredicted RBP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 UBE2V1Q13404 147 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 PRPF4BQ13523 1007 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 KRT81Q14533 505 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 CCDC96Q2M329 555 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 TMEM266Q2M3C6 531 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 KIF19Q2TAC6 998 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 FAM98BQ52LJ0 330 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 NADSYN1Q6IA69 706 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 DHRS7BQ6IAN0 325 aaPredicted RBP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC30A6Q6NXT4 461 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 GFRALQ6UXV0 394 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 ZNF534Q76KX8 674 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 KRT74Q7RTS7 529 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 LDB1Q86U70 411 aaPredicted RBP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 TMPRSS12Q86WS5 348 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 SFR1Q86XK3 245 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 GUF1Q8N442 669 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 KCNH5Q8NCM2 988 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 PPP4R1Q8TF05 950 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 PTPMT1Q8WUK0 201 aaPredicted RBP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 ZNF622Q969S3 477 aaKnown RBP eCLIP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 CDCA5Q96FF9 252 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 TXLNGYQ9BZA5 131 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 LRMDAQ9H2I8 198 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 SLCO5A1Q9H2Y9 848 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 KCNK15Q9H427 330 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 UBTD1Q9HAC8 227 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 CD93Q9NPY3 652 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 TAB2Q9NYJ8 693 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 RCC2Q9P258 522 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 LARSQ9P2J5 1176 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 EVPLQ92817 2033 aa4.17□□□□□ -1.74
SMCHD1-213ENST00000609587 PRAG1Q86YV5 1406 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 SAA2-SAA4A0A096LPE2 208 aa4.16□□□□□ -1.74
SMCHD1-213ENST00000609587 H0YIN7 160 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms