RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 TTC25Q96NG3 672 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 CATSPER2Q96P56 530 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 TGM7Q96PF1 710 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 VAT1Q99536 393 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 ANP32EQ9BTT0 268 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 ADNPQ9H2P0 1102 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 TRIT1Q9H3H1 467 aaKnown RBP7.49□□□□□ -1.21
CUX1-219ENST00000606749 GOLPH3Q9H4A6 298 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 CLMPQ9H6B4 373 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 GPN2Q9H9Y4 310 aaPredicted RBP7.49□□□□□ -1.21
CUX1-219ENST00000606749 UGT1A7Q9HAW7 530 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 UGT1A10Q9HAW8 530 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 UGT1A8Q9HAW9 530 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 SIDT1Q9NXL6 827 aaKnown RBP7.49□□□□□ -1.21
CUX1-219ENST00000606749 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.49□□□□□ -1.21
CUX1-219ENST00000606749 IL17CQ9P0M4 197 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 TRIM10Q9UDY6 481 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 IL17BQ9UHF5 180 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 TFR2Q9UP52 801 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 WDR37Q9Y2I8 494 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 PCDHA13Q9Y5I0 950 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 PIEZO2Q9H5I5 2752 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 ZNF462Q96JM2 2506 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 hCG_1818297A0A087WSY0 165 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 OR52A4PA6NMU1 304 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 HACD1B0YJ81 288 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 F5H423 210 aaPredicted RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 GAPDHSO14556 408 aaPredicted RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 TERTO14746 1132 aaKnown RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 BUD23O43709 281 aaKnown RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 KIF1CO43896 1103 aaKnown RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 KCNJ13O60928 360 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 PPFIA2O75334 1257 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 POP7O75817 140 aaKnown RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 LCA5LO95447 670 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 DLGAP3O95886 979 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 VCLP18206 1134 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 SPAM1P38567 509 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 TNNT3P45378 269 aaPredicted RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 CCR10P46092 362 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 LEPRP48357 1165 aaKnown RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 SEPHS1P49903 392 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 CSRP3P50461 194 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 DRG2P55039 364 aaKnown RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 POLE2P56282 527 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 SH3BP2P78314 561 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 FOXM1Q08050 763 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 DMPKQ09013 629 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 MPP3Q13368 585 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 XRCC4Q13426 336 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 GTF2H3Q13889 308 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 MAP7Q14244 749 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 GPR18Q14330 331 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 IL11RAQ14626 422 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 LDLRAP1Q5SW96 308 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 TMEM220Q6QAJ8 160 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 FAM151BQ6UXP7 276 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 ATG14Q6ZNE5 492 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 AMZ2Q86W34 360 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 TRAPPC5Q8IUR0 188 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 RBM12BQ8IXT5 1001 aaKnown RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 RASGEF1AQ8N9B8 481 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 IPMKQ8NFU5 416 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 BLOC1S5Q8TDH9 187 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 KLHL6Q8WZ60 621 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 KRT35Q92764 455 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 KIAA1143Q96AT1 154 aaPredicted RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 HAUS1Q96CS2 278 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 CXorf40BQ96DE9 158 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 EFHD1Q9BUP0 239 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 HEMGNQ9BXL5 484 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 ULBP3Q9BZM4 244 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 ZNF768Q9H5H4 540 aaKnown RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 C10orf88Q9H8K7 445 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 POT1Q9NUX5 634 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 HACD3Q9P035 362 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 KLHL8Q9P2G9 620 aaPredicted RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 EPHA6Q9UF33 1036 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 TUBD1Q9UJT1 453 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 TRHDEQ9UKU6 1024 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 PKP3Q9Y446 797 aa7.48□□□□□ -1.21
CUX1-219ENST00000606749 DNMT3AQ9Y6K1 912 aaPredicted RBP7.48□□□□□ -1.21
CUX1-219ENST00000606749 GLYATL1P3A0A0U1RQE8 302 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 H7C0C1 242 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 GPR39O43194 453 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 RASSF9O75901 435 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 AGTP01019 485 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 PRKAR1AP10644 381 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 ZNF28P17035 718 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 HLA-DPA1P20036 260 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 FECHP22830 423 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 F8A1P23610 371 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 RBL1P28749 1068 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 STAT5AP42229 794 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 HALP42357 657 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 ATP5OP48047 213 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 MARCKSL1P49006 195 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 CTSCP53634 463 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 CDC20Q12834 499 aa7.47□□□□□ -1.21
CUX1-219ENST00000606749 KCNAB2Q13303 367 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms