RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 DNAJC28Q9NX36 388 aa7.58□□□□□ -1.2
MSH6-211ENST00000606499 FAM8A1Q9UBU6 413 aa7.58□□□□□ -1.2
MSH6-211ENST00000606499 PLEKHM1Q9Y4G2 1056 aa7.58□□□□□ -1.2
MSH6-211ENST00000606499 PCDHGA5Q9Y5G8 931 aa7.58□□□□□ -1.2
MSH6-211ENST00000606499 ZFC3H1O60293 1989 aaKnown RBP7.58□□□□□ -1.2
MSH6-211ENST00000606499 CFAP54Q96N23 3096 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 IQCF5A8MTL0 148 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 POC1B-GALNT4F8VUJ3 575 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 PRMT5O14744 637 aaPredicted RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 TNFRSF10CO14798 259 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 CHUKO15111 745 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 PFDN6O15212 129 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 GRID2O43424 1007 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 NUAK1O60285 661 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 NIPSNAP2O75323 286 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 RASGRP1O95267 797 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 IVLP07476 585 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 RETP07949 1114 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 CELA2BP08218 269 aaPredicted RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 ACP5P13686 325 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 H2AFXP16104 143 aaPredicted RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 ZNF7P17097 686 aaPredicted RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 ENGP17813 658 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 ITGB6P18564 788 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 GCAP28676 217 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 PPARGP37231 505 aaPredicted RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 DPP6P42658 865 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 NSG1P42857 185 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 CD151P48509 253 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 PRLHRP49683 370 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 HK3P52790 923 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 PGGT1BP53609 377 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 CDKN2DP55273 166 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 IL9RQ01113 521 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 NAB1Q13506 487 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 BMPR2Q13873 1038 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 SF3A2Q15428 464 aaKnown RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 KLHL38Q2WGJ6 581 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 BCL7AQ4VC05 210 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 PYCR3Q53H96 274 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 BEND6Q5SZJ8 279 aaPredicted RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 PTRHD1Q6GMV3 140 aaKnown RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 SLC23A3Q6PIS1 610 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 TMEM220Q6QAJ8 160 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 NAPRTQ6XQN6 538 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 CHST15Q7LFX5 561 aaPredicted RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 RABEPKQ7Z6M1 372 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 C11orf96Q7Z7L8 435 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 GALNT7Q86SF2 657 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 LRRTM4Q86VH4 590 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 ZC3HC1Q86WB0 502 aaKnown RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 LRRC6Q86X45 466 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 GALNT13Q8IUC8 556 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 PHACTR4Q8IZ21 702 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 KRT222Q8N1A0 295 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 CEP76Q8TAP6 659 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 EPS8L3Q8TE67 593 aaKnown RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 HEXDCQ8WVB3 486 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 DCAKDQ8WVC6 231 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 HNRNPLLQ8WVV9 542 aaKnown RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 SLC44A1Q8WWI5 657 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 SKA1Q96BD8 255 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 ZBTB9Q96C00 473 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 SCARF2Q96GP6 870 aaPredicted RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 OR2M4Q96R27 311 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 RBBP8Q99708 897 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 MCMBPQ9BTE3 642 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 LRRC61Q9BV99 259 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 IRF2BPLQ9H1B7 796 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 IL21RQ9HBE5 538 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 NSMCE4AQ9NXX6 385 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 TXNDC16Q9P2K2 825 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 NCDNQ9UBB6 729 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 SLC23A2Q9UGH3 650 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 APOBEC3BQ9UH17 382 aaKnown RBP7.57□□□□□ -1.2
MSH6-211ENST00000606499 ZNHIT2Q9UHR6 403 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 GNPTGQ9UJJ9 305 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 SLC6A14Q9UN76 642 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 VPS9D1Q9Y2B5 631 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 GPSM3Q9Y4H4 160 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 ST14Q9Y5Y6 855 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 RALGAPA1Q6GYQ0 2036 aa7.57□□□□□ -1.2
MSH6-211ENST00000606499 PIKFYVEQ9Y2I7 2098 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 SPEGQ15772 3267 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 FAM95CA0A1B0GW59 222 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 LNP1A1A4G5 178 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 SMIM23A6NLE4 172 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 GPR89AB7ZAQ6 455 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 ARHGAP33O14559 1287 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 KMOO15229 486 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 MAGEC1O60732 1142 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 SDC3O75056 442 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 AP2A2O94973 939 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 TRIM16O95361 564 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 LMNAP02545 664 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 FTH1P02794 183 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 ESR1P03372 595 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 CSF2P04141 144 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 INHBAP08476 426 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 NUDT17P0C025 328 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms