RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 ZNF564Q8TBZ8 553 aaPredicted RBP3.37□□□□□ -1.87
NEB-218ENST00000603639 MUS81Q96NY9 551 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 RERGLQ9H628 205 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 TMEM27Q9HBJ8 222 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 COLEC10Q9Y6Z7 277 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 XRN1Q8IZH2 1706 aaKnown RBP3.37□□□□□ -1.87
NEB-218ENST00000603639 MAGEB4O15481 346 aaPredicted RBP3.37□□□□□ -1.87
NEB-218ENST00000603639 KHDRBS3O75525 346 aaKnown RBP3.37□□□□□ -1.87
NEB-218ENST00000603639 ANGPTL1O95841 491 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 PTPN1P18031 435 aaKnown RBP3.37□□□□□ -1.87
NEB-218ENST00000603639 TSPAN8P19075 237 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 LCN1P31025 176 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 HCCSP53701 268 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 FOXD4Q12950 439 aaPredicted RBP3.37□□□□□ -1.87
NEB-218ENST00000603639 TLDC1Q6P9B6 456 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 NAPRTQ6XQN6 538 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 RALGPS2Q86X27 583 aaPredicted RBP3.37□□□□□ -1.87
NEB-218ENST00000603639 FAM20CQ8IXL6 584 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 PDP1Q9P0J1 537 aaPredicted RBP3.37□□□□□ -1.87
NEB-218ENST00000603639 RPS6KB2Q9UBS0 482 aa3.37□□□□□ -1.87
NEB-218ENST00000603639 A0A1W2PP18 115 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 ITGA2BP08514 1039 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 SATL1Q86VE3 508 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 COA1Q9GZY4 146 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 ELAC1Q9H777 363 aaKnown RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 BMPR2Q13873 1038 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 QRICH1Q2TAL8 776 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 ZNF404Q494X3 552 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 DCAF15Q66K64 600 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 ZPBP2Q6X784 338 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 ARHGAP36Q6ZRI8 547 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 GALNT12Q8IXK2 581 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 OR5K1Q8NHB7 308 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 FBP2O00757 339 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 SRCP12931 536 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 ARMC6Q6NXE6 501 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 METTL2BQ6P1Q9 378 aaKnown RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 ASRGL1Q7L266 308 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 SLC51BQ86UW2 128 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 SLC25A36Q96CQ1 311 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 SLC6A14Q9UN76 642 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 WASF2Q9Y6W5 498 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 BPNT1O95861 308 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 PRKAR2AP13861 404 aaKnown RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 TKTL1P51854 596 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 ELOAQ14241 798 aaKnown RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 WSCD2Q2TBF2 565 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 MRPS31Q92665 395 aaKnown RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 CTRCQ99895 268 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 CDH5P33151 784 aaPredicted RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 TRIM23P36406 574 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 PABPC1L2AQ5JQF8 200 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 CPTPQ5TA50 214 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 TP63Q9H3D4 680 aaPredicted RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 MROH8Q9H579 483 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 MARK1Q9P0L2 795 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 DENND3A2RUS2 1198 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 MYMKA6NI61 221 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 DLDP09622 509 aaKnown RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 MANFP55145 182 aaKnown RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 PTSQ03393 145 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 NME3Q13232 169 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 CBFBQ13951 182 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 RBMS2Q15434 407 aaKnown RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 SYT16Q17RD7 645 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 ARMC12Q5T9G4 340 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 GRHL2Q6ISB3 625 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 TMEM205Q6UW68 189 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 DHDDSQ86SQ9 333 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 GPR65Q8IYL9 337 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 BHLHE22Q8NFJ8 381 aaPredicted RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 PHF23Q9BUL5 403 aaPredicted RBP3.36□□□□□ -1.87
NEB-218ENST00000603639 ABCB9Q9NP78 766 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 RAP2AP10114 183 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 TYRP14679 529 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 CCNFP41002 786 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 AIF1P55008 147 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 RAB10P61026 200 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 PWP1Q13610 501 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 BTBD16Q32M84 506 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 IQCCQ4KMZ1 466 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 ZMAT1Q5H9K5 638 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 DPY19L3Q6ZPD9 716 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 FBXO25Q8TCJ0 367 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 FAIM2Q9BWQ8 316 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 GBA3Q9H227 469 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 ALG2Q9H553 416 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 RLIMQ9NVW2 624 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 SDHAF2Q9NX18 166 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 GTSE1Q9NYZ3 720 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 PCDHB7Q9Y5E2 793 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 HGFP14210 728 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 YBX3P16989 372 aaKnown RBP eCLIP3.36□□□□□ -1.87
NEB-218ENST00000603639 PGAM1P18669 254 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 WEE1P30291 646 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 CENPAP49450 140 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 SLC25A3Q00325 362 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 DCLRE1AQ6PJP8 1040 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 CCDC28AQ8IWP9 274 aa3.36□□□□□ -1.87
NEB-218ENST00000603639 PPP1R13LQ8WUF5 828 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms